RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ZBTB43O43298 467 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 FAM109BQ6ICB4 259 aaPredicted RBP16.98■□□□□ 0.31
SF3B5-201ENST00000367569 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 SGMS1Q86VZ5 419 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 FAM161BQ96MY7 647 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 MTA3Q9BTC8 594 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 ABHD16BQ9H3Z7 469 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 STARD7Q9NQZ5 370 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 PDGFCQ9NRA1 345 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 DOCK5Q9H7D0 1870 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 CUL9Q8IWT3 2517 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 MOXD2PA6NHM9 499 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 EPHB4P54760 987 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 FAAP100Q0VG06 881 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 RTN1Q16799 776 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 SYNE3Q6ZMZ3 975 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 SYTL5Q8TDW5 730 aaPredicted RBP16.97■□□□□ 0.31
SF3B5-201ENST00000367569 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
SF3B5-201ENST00000367569 RRP36Q96EU6 259 aaKnown RBP16.97■□□□□ 0.31
SF3B5-201ENST00000367569 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 TAAR1Q96RJ0 339 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 SPZ1Q9BXG8 430 aa16.97■□□□□ 0.31
SF3B5-201ENST00000367569 MRPL11Q9Y3B7 192 aaKnown RBP16.97■□□□□ 0.31
SF3B5-201ENST00000367569 PNMA6FA0A0J9YX94 578 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 C6orf222P0C671 652 aaPredicted RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 CALM1P0DP23 149 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 CALM2P0DP24 149 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 CALM3P0DP25 149 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 EIF2AK2P19525 551 aaKnown RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 CST5P28325 142 aaPredicted RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 CDC27P30260 824 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 ANKRD33Q7Z3H0 272 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 TMTC2Q8N394 836 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 FANCBQ8NB91 859 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 TOX2Q96NM4 488 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 UPF3AQ9H1J1 476 aaKnown RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 SEC63Q9UGP8 760 aaKnown RBP16.96■□□□□ 0.31
SF3B5-201ENST00000367569 CDH23Q9H251 3354 aa16.96■□□□□ 0.31
SF3B5-201ENST00000367569 ASB14A6NK59 587 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 CTAGE5O15320 804 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 DTNBO60941 627 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 ASGR1P07306 291 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 RAG1P15918 1043 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 GJA9P57773 515 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 PDE4DQ08499 809 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 NOL8Q76FK4 1167 aaKnown RBP16.95■□□□□ 0.3
SF3B5-201ENST00000367569 MAP3K14Q99558 947 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
SF3B5-201ENST00000367569 PNMA2Q9UL42 364 aa16.95■□□□□ 0.3
SF3B5-201ENST00000367569 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 DLL1O00548 723 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 PSMA5P28066 241 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.32e-8■■■□□ 16.5
SF3B5-201ENST00000367569 CDK7P50613 346 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 TOB2Q14106 344 aaPredicted RBP16.94■□□□□ 0.3
SF3B5-201ENST00000367569 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 HEATR3Q7Z4Q2 680 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
SF3B5-201ENST00000367569 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 SPC25Q9HBM1 224 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 NCOA5Q9HCD5 579 aaKnown RBP16.94■□□□□ 0.3
SF3B5-201ENST00000367569 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
SF3B5-201ENST00000367569 ELP1O95163 1332 aa16.94■□□□□ 0.3
SF3B5-201ENST00000367569 UNC80Q8N2C7 3258 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 GNAQP50148 359 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 CCT2P78371 535 aaKnown RBP16.93■□□□□ 0.3
SF3B5-201ENST00000367569 BEX3Q00994 111 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 GNASQ5JWF2 1037 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 TAPT1Q6NXT6 567 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
SF3B5-201ENST00000367569 MYCLP12524 364 aaPredicted RBP16.92■□□□□ 0.3
SF3B5-201ENST00000367569 SMPD1P17405 629 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 ADD1P35611 737 aaKnown RBP16.92■□□□□ 0.3
SF3B5-201ENST00000367569 HSD17B4P51659 736 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
SF3B5-201ENST00000367569 TNFAIP2Q03169 654 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 FPGSQ05932 587 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 STK3Q13188 491 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 UBE2SQ16763 222 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 WWC2Q6AWC2 1192 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 COPS5Q92905 334 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 RNPC3Q96LT9 517 aaKnown RBP16.92■□□□□ 0.3
SF3B5-201ENST00000367569 RMDN3Q96TC7 470 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 LZTS2Q9BRK4 669 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 SEMA6BQ9H3T3 888 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 PXMP2Q9NR77 195 aa16.92■□□□□ 0.3
SF3B5-201ENST00000367569 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms