RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SLC13A4Q9UKG4 626 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 NESP48681 1621 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 ABCC1P33527 1531 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 CTNND1O60716 968 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 TRPA1O75762 1119 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 ZNF148Q9UQR1 794 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 GPC4O75487 556 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 MTHFSDQ2M296 383 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 PCDHB4Q9Y5E5 795 aa12.48□□□□□ -0.41
SPTBN1-202ENST00000356805 FBXO38Q6PIJ6 1188 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 PYCARDQ9ULZ3 195 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 NDUFB9Q9Y6M9 179 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 MORC3Q14149 939 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 TNNI3KQ59H18 835 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 AKT3Q9Y243 479 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 FPGT-TNNI3KV9GXZ4 949 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 TMEM191BP0C7N4 346 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 PPM1KQ8N3J5 372 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 DTNBO60941 627 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 GANCQ8TET4 914 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 THRAP3Q9Y2W1 955 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 DCTN3O75935 186 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 SCYL3Q8IZE3 742 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 CNPY4Q8N129 248 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 CPSF3Q9UKF6 684 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 H3BRJ5 948 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 ALAS1P13196 640 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 POLR2BP30876 1174 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 STX1BP61266 288 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 PDE1BQ01064 536 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 TRIM59Q8IWR1 403 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 FAM227BQ96M60 508 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 POLE2P56282 527 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 DLGAP5Q15398 846 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 NAA35Q5VZE5 725 aa12.47□□□□□ -0.41
SPTBN1-202ENST00000356805 N4BP1O75113 896 aaKnown RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 ANTXR1Q9H6X2 564 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 AS3MTQ9HBK9 375 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 ARHGAP10A1A4S6 786 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 MAFGO15525 162 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 MYL1P05976 194 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 TMEM259Q4ZIN3 620 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 RSRC2Q7L4I2 434 aaKnown RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 PARD6BQ9BYG5 372 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 RTEL1Q9NZ71 1219 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 GUCY2DQ02846 1103 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 TMED1Q13445 227 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 TBCCQ15814 346 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 ABTB1Q969K4 478 aaPredicted RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 PANX2Q96RD6 677 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 DSCC1Q9BVC3 393 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 HACD3Q9P035 362 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 PDE8AO60658 829 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 PTPREP23469 700 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 E2F5Q15329 346 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 TBC1D10BQ4KMP7 808 aaPredicted RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 SPATA5Q8NB90 893 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 GSDMAQ96QA5 445 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
SPTBN1-202ENST00000356805 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 ZNF532Q9HCE3 1301 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 ADCY1Q08828 1119 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 PPP1R2P3Q6NXS1 205 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 SARM1Q6SZW1 724 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 RAP1GDS1P52306 607 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 ARHGDIAP52565 204 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 GPR162Q16538 588 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 STAMBPL1Q96FJ0 436 aa12.46□□□□□ -0.42
SPTBN1-202ENST00000356805 PYGLP06737 847 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PFKFB1P16118 471 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 TTC1Q99614 292 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 INTUQ9ULD6 942 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 HMGXB3Q12766 1538 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 EEF1DP29692 281 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 APPBP2Q92624 585 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PACSIN2Q9UNF0 486 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 MAN1A2O60476 641 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 OCM2P0CE71 109 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 OCMP0CE72 109 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PCYT1AP49585 367 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms