RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CIITAP33076 1130 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 LRRC47Q8N1G4 583 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 GDAP1Q8TB36 358 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ATP6V1E2Q96A05 226 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 TTC25Q96NG3 672 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 UIMC1Q96RL1 719 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 LMTK2Q8IWU2 1503 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 PASKQ96RG2 1323 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 NDUFAB1O14561 156 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 THAP12O43422 761 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 PCP11498 1178 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 U2AF2P26368 475 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 GOLGA8FQ08AF8 430 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 GOLGA8DPQ0D2H9 430 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 SLC38A10Q9HBR0 1119 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ZAP70P43403 619 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 LMNB2Q03252 620 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 PHLDB3Q6NSJ2 640 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 KCNJ14Q9UNX9 436 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 TTC30AQ86WT1 665 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF654Q8IZM8 581 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 SUCLG2Q96I99 432 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 AMNQ9BXJ7 453 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 QTRT2Q9H974 415 aaKnown RBP6.03□□□□□ -1.44
PTPRD-202ENST00000356435 VPS54Q9P1Q0 977 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 ZMYM6O95789 1325 aa6.03□□□□□ -1.44
PTPRD-202ENST00000356435 HNRNPCL2B2RXH8 293 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 GSTA4O15217 222 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 HNRNPCL1O60812 293 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SH3BGRP55822 239 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 RBM6P78332 1123 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 DOK7Q18PE1 504 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 CCDC38Q502W7 563 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SRRM1Q8IYB3 904 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 KCND1Q9NSA2 647 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PSAPP07602 524 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SAT1P21673 171 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 YWHAGP61981 247 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 MMEL1Q495T6 779 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 LONRF3Q496Y0 759 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ARHGEF18Q6ZSZ5 1173 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 C2orf69Q8N8R5 385 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TRIM58Q8NG06 486 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PI4K2BQ8TCG2 481 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PHKBQ93100 1093 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 LARSQ9P2J5 1176 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 FAN1Q9Y2M0 1017 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 RPAP1Q9BWH6 1393 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PHLPP2Q6ZVD8 1323 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ARL4AP40617 200 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ASPRV1Q53RT3 343 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 MYLK4Q86YV6 388 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TEX2Q8IWB9 1127 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SLITRK6Q9H5Y7 841 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 A0A1B0GUA9 196 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 LAD1O00515 517 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 FMNL1O95466 1100 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 MYL3P08590 195 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TIMM10P62072 90 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ARL13BQ3SXY8 428 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 RDH13Q8NBN7 331 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 N4BP2L2Q92802 583 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 CCDC124Q96CT7 223 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 FTOQ9C0B1 505 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PCDHB4Q9Y5E5 795 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 MAD1L1Q9Y6D9 718 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ATP7AQ04656 1500 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF804BA4D1E1 1349 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 VIRMAQ69YN4 1812 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 H7C0C1 242 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TXNDC9O14530 226 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 EVI5O60447 810 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF202O95125 648 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 CTNNA1P35221 906 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ATP5OP48047 213 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 MORC3Q14149 939 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 LRCH2Q5VUJ6 765 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 RNF10Q8N5U6 811 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 NT5C1BQ96P26 610 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 KLHL14Q9P2G3 628 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TMEM247A6NEH6 219 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 CSPG5O95196 566 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SLC4A1P02730 911 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SCG2P13521 617 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ABCB4P21439 1286 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 CYP2C19P33261 490 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ARMCX2Q7L311 632 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PPM1KQ8N3J5 372 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 CCDC17Q96LX7 622 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 MMTAG2Q9BU76 263 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 SMYD2Q9NRG4 433 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 STK17AQ9UEE5 414 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 KRIT1O00522 736 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PTK2Q05397 1052 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 KRT71Q3SY84 523 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 NOSTRINQ8IVI9 506 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TSC1Q92574 1164 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ACCSQ96QU6 501 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PYGLP06737 847 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms