RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PLSCR1O15162 318 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 PRPF3O43395 683 aaKnown RBP10.72□□□□□ -0.69
GABPA-201ENST00000354828 LIFRP42702 1097 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 TRAPPC10P48553 1259 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 OSTNP61366 133 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 NEDD9Q14511 834 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 DDX12PQ92771 950 aa10.72□□□□□ -0.69
GABPA-201ENST00000354828 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
GABPA-201ENST00000354828 LAD1O00515 517 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 TNNC1P63316 161 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 ZSCAN30Q86W11 494 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 INCENPQ9NQS7 918 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 STK25O00506 426 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 GNA14O95837 355 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
GABPA-201ENST00000354828 ZBTB33Q86T24 672 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 GBA2Q9HCG7 927 aaPredicted RBP10.71□□□□□ -0.69
GABPA-201ENST00000354828 SLC39A2Q9NP94 309 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 PCDHA6Q9UN73 950 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 PCDHA8Q9Y5H6 950 aa10.71□□□□□ -0.69
GABPA-201ENST00000354828 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 IFNAR1P17181 557 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 IGSF22Q8N9C0 903 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 PPP1R14CQ8TAE6 165 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 PI4K2BQ8TCG2 481 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 FOXP1Q9H334 677 aaPredicted RBP10.71□□□□□ -0.7
GABPA-201ENST00000354828 ARMCX3Q9UH62 379 aaPredicted RBP10.71□□□□□ -0.7
GABPA-201ENST00000354828 SERPINA10Q9UK55 444 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 TTLL3Q9Y4R7 772 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 UBR1Q8IWV7 1749 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 CEMIPQ8WUJ3 1361 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 DENND3A2RUS2 1198 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 SRGNP10124 158 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 GABPAQ06546 454 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 PNOCQ13519 176 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 MAP1SQ66K74 1059 aaPredicted RBP10.71□□□□□ -0.7
GABPA-201ENST00000354828 TXNDC16Q9P2K2 825 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 INPP5FQ9Y2H2 1132 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 FAM169AQ9Y6X4 670 aa10.71□□□□□ -0.7
GABPA-201ENST00000354828 ESPNB1AK53 854 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 SEL1L2Q5TEA6 688 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 SYMPKQ92797 1274 aaKnown RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 ANKRD36BP1Q96IX9 119 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 CLIC6Q96NY7 704 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 MTIF3Q9H2K0 278 aaKnown RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 CTTNBP2NLQ9P2B4 639 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 E7EVH7 732 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 PFKFB1P16118 471 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 AP3B2Q13367 1082 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 USP17L6PQ6QN14 398 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 LARP4BQ92615 738 aaKnown RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 FAM204AQ9H8W3 233 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 MTUS1Q9ULD2 1270 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 POLIQ9UNA4 740 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 NFE2L3Q9Y4A8 694 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 FAM170AA1A519 330 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 CSF1RP07333 972 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 LACTBP83111 547 aaPredicted RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 CKAP4Q07065 602 aaKnown RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 ATG9AQ7Z3C6 839 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 NBPF11Q86T75 865 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 FAM167AQ96KS9 214 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 SPATA33Q96N06 139 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 CLSTN2Q9H4D0 955 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 TMCO3Q6UWJ1 677 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 RSRC2Q7L4I2 434 aaKnown RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 TBC1D10CQ8IV04 446 aa10.7□□□□□ -0.7
GABPA-201ENST00000354828 TRMT44Q8IYL2 757 aaKnown RBP10.7□□□□□ -0.7
GABPA-201ENST00000354828 MEGF6O75095 1541 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 ARHGEF37A1IGU5 675 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 AKR1B15C9JRZ8 316 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 C6orf222P0C671 652 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 NR5A1Q13285 461 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 CTTNQ14247 550 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 RABL6Q3YEC7 729 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 SLC9C1Q4G0N8 1177 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 SNX25Q9H3E2 840 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 HAUS2Q9NVX0 235 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 PIK3CAP42336 1068 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 JAK3P52333 1124 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 ADAM9Q13443 819 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 CCDC14Q49A88 953 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 TWF2Q6IBS0 349 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 LEKR1Q6ZMV7 388 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 MAATS1Q7Z4T9 603 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 CACTINQ8WUQ7 758 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 TEX13BQ9BXU2 312 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 LZTFL1Q9NQ48 299 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 FLT1P17948 1338 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 COL5A2P05997 1499 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 N4BP1O75113 896 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 STK10O94804 968 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms