RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 WASF1Q92558 559 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 MAGOHBQ96A72 148 aaKnown RBP16.75■□□□□ 0.27
PTBP1-201ENST00000349038 ATP6V1G3Q96LB4 118 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 CSF1RP07333 972 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 FECHP22830 423 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 SPAG1Q07617 926 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 DDR1Q08345 913 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
PTBP1-201ENST00000349038 FOXP1Q9H334 677 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-201ENST00000349038 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
PTBP1-201ENST00000349038 ZNF263O14978 683 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-201ENST00000349038 CRYMQ14894 314 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 XDHP47989 1333 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 A0A0G2JS52 829 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
PTBP1-201ENST00000349038 ANP32DO95626 131 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 RPN1P04843 607 aaKnown RBP16.74■□□□□ 0.27
PTBP1-201ENST00000349038 PSMD2Q13200 908 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 ALX1Q15699 326 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 GKAP1Q5VSY0 366 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-201ENST00000349038 EMBQ6PCB8 327 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 CCDC63Q8NA47 563 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 WDR17Q8IZU2 1322 aa16.74■□□□□ 0.27
PTBP1-201ENST00000349038 PDHA1P08559 390 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 SLCO1A2P46721 670 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 PAK2Q13177 524 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 PRPF4BQ13523 1007 aaKnown RBP16.73■□□□□ 0.27
PTBP1-201ENST00000349038 ALS2CLQ60I27 953 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 CAPRIN2Q6IMN6 1127 aaKnown RBP16.73■□□□□ 0.27
PTBP1-201ENST00000349038 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 TRIM58Q8NG06 486 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 ELAC2Q9BQ52 826 aaKnown RBP16.73■□□□□ 0.27
PTBP1-201ENST00000349038 SALL4Q9UJQ4 1053 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 HYOU1Q9Y4L1 999 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 ANKRD20A8PQ5CZ79 823 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 ROBO1Q9Y6N7 1651 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 TCRBV5S4A2TA0A5A2 114 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 CASKIN2Q8WXE0 1202 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 SAAL1Q96ER3 474 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 TACC3Q9Y6A5 838 aa16.73■□□□□ 0.27
PTBP1-201ENST00000349038 MBD4O95243 580 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 KIF11P52732 1056 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
PTBP1-201ENST00000349038 LLGL1Q15334 1064 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 STAG1Q8WVM7 1258 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
PTBP1-201ENST00000349038 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 A8MUI8 341 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 PAPPAQ13219 1627 aa16.72■□□□□ 0.27
PTBP1-201ENST00000349038 C21orf2O43822 256 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-201ENST00000349038 PDE6AP16499 860 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 NLRP5P59047 1200 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
PTBP1-201ENST00000349038 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 TTC38Q5R3I4 469 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SPICE1Q8N0Z3 855 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 ZNF483Q8TF39 744 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-201ENST00000349038 EXOC1Q9NV70 894 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 KCNK3O14649 394 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SEMA3EO15041 775 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 EPHB6O15197 1021 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 CEP104O60308 925 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SLC1A4P43007 532 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SH3RF1Q7Z6J0 888 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SLC17A8Q8NDX2 589 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 MTRQ99707 1265 aa16.71■□□□□ 0.27
PTBP1-201ENST00000349038 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-201ENST00000349038 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
PTBP1-201ENST00000349038 SKOR1P84550 965 aa16.71■□□□□ 0.26
PTBP1-201ENST00000349038 TRIM14Q14142 442 aa16.71■□□□□ 0.26
PTBP1-201ENST00000349038 FAM47EQ6ZV65 393 aa16.71■□□□□ 0.26
PTBP1-201ENST00000349038 RAPGEF5Q92565 580 aa16.71■□□□□ 0.26
PTBP1-201ENST00000349038 MTMR8Q96EF0 704 aa16.71■□□□□ 0.26
PTBP1-201ENST00000349038 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.26
PTBP1-201ENST00000349038 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 MYO5AQ9Y4I1 1855 aaKnown RBP16.7■□□□□ 0.26
PTBP1-201ENST00000349038 PSMA7O14818 248 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 XBP1P17861 261 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 MAGEB6Q8N7X4 407 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 DDX47Q9H0S4 455 aaKnown RBP16.7■□□□□ 0.26
PTBP1-201ENST00000349038 LRRC4CQ9HCJ2 640 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 ATP8A1Q9Y2Q0 1164 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 ITIH6Q6UXX5 1313 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 RAD51CO43502 376 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 PLEKHA8P1O95397 391 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 SLC8A1P32418 973 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 DHX9Q08211 1270 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms