RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 ZFYVE9O95405 1425 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 NVLO15381 856 aaKnown RBP13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 CNGA1P29973 690 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 PDCD2Q16342 344 aaPredicted RBP13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 MAML1Q92585 1016 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 DAAM1Q9Y4D1 1078 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 ADCY9O60503 1353 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 FGAP02671 866 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 ATP5JP18859 108 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 NNTQ13423 1086 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 PRPSAP1Q14558 356 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 CCNYQ8ND76 341 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 IQCDQ96DY2 449 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 PFKFB2O60825 505 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 SCG2P13521 617 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 RFX1P22670 979 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 IL13P35225 146 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 CDR2Q01850 454 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 FBXO41Q8TF61 875 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 SPTLC3Q9NUV7 552 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 PPP2R5BQ15173 497 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 EFCAB13Q8IY85 973 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 ZNF277Q9NRM2 450 aaPredicted RBP13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
SEMA6A-202ENST00000343348 MSH2P43246 934 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 CDC26Q8NHZ8 85 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 NEURL1BA8MQ27 555 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 MAP3K7O43318 606 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 PPP2R5EQ16537 467 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 ADCK5Q3MIX3 580 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 CACTINQ8WUQ7 758 aaKnown RBP13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 HESX1Q9UBX0 185 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 CPP00450 1065 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 PLA2G4DQ86XP0 818 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 DENND4BO75064 1496 aaPredicted RBP13.21□□□□□ -0.29
SEMA6A-202ENST00000343348 MEIS1O00470 390 aa13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 GFPT2O94808 682 aa13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 LMNB1P20700 586 aa13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 BASP1P80723 227 aaKnown RBP13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 PCDHA5Q9Y5H7 936 aa13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 MAST3O60307 1309 aa13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 MYO1FO00160 1098 aa13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 RYBPQ8N488 228 aaPredicted RBP13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.3
SEMA6A-202ENST00000343348 POLR2MP0CAP2 368 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 CTSWP56202 376 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 LRRC24Q50LG9 513 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 SEPT9Q9UHD8 586 aaPredicted RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 SCOCQ9UIL1 159 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 EEF1DP29692 281 aaKnown RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 ART3Q13508 389 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 IQCB1Q15051 598 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 FAM26FQ5R3K3 315 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 H0YIN7 160 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 KIF11P52732 1056 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 EPHB4P54760 987 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 PLS3P13797 630 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 CDC25AP30304 524 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 ODR4Q5SWX8 454 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 TEKT3Q9BXF9 490 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 KCNQ3O43525 872 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 STX1BP61266 288 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 PPP4R4Q6NUP7 873 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 PARD3BQ8TEW8 1205 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 SCHIP1Q9P0W5 487 aaPredicted RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 NR2F2P24468 414 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 GNL1P36915 607 aaPredicted RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 ESRRGP62508 458 aa13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
SEMA6A-202ENST00000343348 GADL1Q6ZQY3 521 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms