RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 GUCY2DQ02846 1103 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MMGT1Q8N4V1 131 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 CCDC43Q96MW1 224 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 SETDB2Q96T68 719 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 LACRTQ9GZZ8 138 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MLXIPQ9HAP2 919 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 BCS1LQ9Y276 419 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 CRKLP46109 303 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MECOMQ03112 1051 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 KLHL30Q0D2K2 578 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 ANKRD40Q6AI12 368 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MMS22LQ6ZRQ5 1243 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 CCDC121Q6ZUS5 278 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 CCDC65Q8IXS2 484 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 GPATCH11Q8N954 259 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 LMBR1Q8WVP7 490 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 CEP89Q96ST8 783 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 TRIM9Q9C026 710 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 MYH15Q9Y2K3 1946 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 HEXIM1O94992 359 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 ABL1P00519 1130 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 IRAK1P51617 712 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 GUCY2FP51841 1108 aa10.42□□□□□ -0.74
TRERF1-201ENST00000340840 RNASE9P60153 205 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 TTC19Q6DKK2 380 aaPredicted RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 ZNF526Q8TF50 670 aaPredicted RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 RPGRQ92834 1020 aaKnown RBP10.42□□□□□ -0.74
TRERF1-201ENST00000340840 CYP2D6P10635 497 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 HPDP32754 393 aaPredicted RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 LRRC63Q05C16 580 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 RPS6KA1Q15418 735 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 ASIC2Q16515 512 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 TCERG1LQ5VWI1 586 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 KCTD16Q68DU8 428 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 TTI2Q6NXR4 508 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 RUFY4Q6ZNE9 571 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 GIMAP7Q8NHV1 300 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 WDR66Q8TBY9 1149 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 ERGIC2Q96RQ1 377 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 LRRC1Q9BTT6 524 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 NYXQ9GZU5 481 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 RIC8AQ9NPQ8 531 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 CAPN7Q9Y6W3 813 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 A0A1W2PQJ5 194 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 RNF225M0QZC1 329 aaPredicted RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 HOXA7P31268 230 aaPredicted RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 NNTQ13423 1086 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 TXNRD1Q16881 649 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 NFRKBQ6P4R8 1299 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 KLHL7Q8IXQ5 586 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 LARP4BQ92615 738 aaKnown RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 RIOK1Q9BRS2 568 aaKnown RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 EPB41L5Q9HCM4 733 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 SAMM50Q9Y512 469 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 PPP1R12BO60237 982 aaPredicted RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 GNA14O95837 355 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 GOLGA8HP0CJ92 632 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 MRPS25P82663 173 aaKnown RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 MEA1Q16626 185 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 FIGNQ5HY92 759 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 RNF10Q8N5U6 811 aaKnown RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 LSM14BQ9BX40 385 aaKnown RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 SH2D4AQ9H788 454 aa10.41□□□□□ -0.74
TRERF1-201ENST00000340840 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
TRERF1-201ENST00000340840 GCOM1H8Y6P7 765 aaPredicted RBP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 CDK17Q00537 523 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 SMCR8Q8TEV9 937 aaPredicted RBP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 TMEM60Q9H2L4 133 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 REXO2Q9Y3B8 237 aaKnown RBP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 DCCP43146 1447 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 CETN3O15182 167 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 FUT2Q10981 343 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 PDCLQ13371 301 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 GRM4Q14833 912 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 KIAA0753Q2KHM9 967 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 CEP85LQ5SZL2 805 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 ZNF662Q6ZS27 426 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 EDEM3Q9BZQ6 932 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 KBTBD4Q9NVX7 518 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 SAP30BPQ9UHR5 308 aaKnown RBP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 PLAGL2Q9UPG8 496 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 LRRC53A6NM62 1247 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 EIF3HO15372 352 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 CEP104O60308 925 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 PLCG2P16885 1265 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 ADCY7P51828 1080 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 POLR2FP61218 127 aaKnown RBP10.4□□□□□ -0.74
TRERF1-201ENST00000340840 FKBP3Q00688 224 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms