RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SFI1A8K8P3 1242 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 ALAS1P13196 640 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 E4F1Q66K89 784 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 PRR12Q9ULL5 1215 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 KIAA1551Q9HCM1 1747 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 CLSTN1O94985 981 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 RIC8AQ9NPQ8 531 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 ANKRD31Q8N7Z5 1873 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 AKR1B15C9JRZ8 316 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 KLK7P49862 253 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 HERC4Q5GLZ8 1057 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 NSMFQ6X4W1 530 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 GPBP1Q86WP2 473 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 KIF18AQ8NI77 898 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 TCEAL9Q9UHQ7 104 aa11.38□□□□□ -0.59
RBFOX1-202ENST00000340209 SCN9AQ15858 1988 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 A0A0U1RQJ8 604 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 MYMKA6NI61 221 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 AMPD3Q01432 767 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 ARID5AQ03989 594 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 PIGOQ8TEQ8 1089 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 ATRIPQ8WXE1 791 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 TRIM9Q9C026 710 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 SPTLC3Q9NUV7 552 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 DDX60LQ5H9U9 1706 aaKnown RBP11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 WNT10BO00744 389 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 DDX12PQ92771 950 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 CRACR2AQ9BSW2 395 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 FAM207AQ9NSI2 230 aaPredicted RBP11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 TFR2Q9UP52 801 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 ERCC5P28715 1186 aaPredicted RBP11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 DNA2P51530 1060 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 ACRBPQ8NEB7 543 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
RBFOX1-202ENST00000340209 M0R2N6 131 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 MYCLP12524 364 aaPredicted RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 KRT9P35527 623 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 GRB10Q13322 594 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 CTTNQ14247 550 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 ECM1Q16610 540 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 CCDC40Q4G0X9 1142 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 ARHGAP27Q6ZUM4 889 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 DAGLBQ8NCG7 672 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 MYRIPQ8NFW9 859 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 SLF1Q9BQI6 1058 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 IGKV6D-41A0A0C4DH26 115 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 FLOT1O75955 427 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 SH3RF1Q7Z6J0 888 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 PYM1Q9BRP8 204 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 MYOZ2Q9NPC6 264 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 TRAF5O00463 557 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 GMPSP49915 693 aaPredicted RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 TCERG1LQ5VWI1 586 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 MMTAG2Q9BU76 263 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 NYAP2Q9P242 653 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 ABCB11O95342 1321 aa11.36□□□□□ -0.59
RBFOX1-202ENST00000340209 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 EPS15P42566 896 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 MNS1Q8NEH6 495 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 DCAF4Q8WV16 495 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 CNOT6LQ96LI5 555 aaKnown RBP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 LAMB1P07942 1786 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 INPP5BP32019 993 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ZKSCAN4Q969J2 545 aaPredicted RBP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ZNF215Q9UL58 517 aaPredicted RBP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ZNF831Q5JPB2 1677 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 DRC1Q96MC2 740 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 ZNF18P17022 549 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 NT5DC1Q5TFE4 455 aa11.35□□□□□ -0.59
RBFOX1-202ENST00000340209 CCDC155Q8N6L0 562 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms