RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 SMARCA1P28370 1054 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 HOXA13P31271 388 aaPredicted RBP16.92■□□□□ 0.3
ERCC1-203ENST00000340192 GNAQP50148 359 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 FSCN1Q16658 493 aaKnown RBP16.92■□□□□ 0.3
ERCC1-203ENST00000340192 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 SRBD1Q8N5C6 995 aaKnown RBP16.92■□□□□ 0.3
ERCC1-203ENST00000340192 FANCBQ8NB91 859 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 RRP36Q96EU6 259 aaKnown RBP16.92■□□□□ 0.3
ERCC1-203ENST00000340192 GDF15Q99988 308 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 Q9Y3F1 56 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 SNX14Q9Y5W7 946 aa16.92■□□□□ 0.3
ERCC1-203ENST00000340192 EIF2AK2P19525 551 aaKnown RBP16.91■□□□□ 0.3
ERCC1-203ENST00000340192 TLE2Q04725 743 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 ARHGEF16Q5VV41 709 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 SAMD3Q8N6K7 520 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 SCFD2Q8WU76 684 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
ERCC1-203ENST00000340192 IWS1Q96ST2 819 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 PXMP2Q9NR77 195 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 MAP3K20Q9NYL2 800 aaKnown RBP16.91■□□□□ 0.3
ERCC1-203ENST00000340192 PRKAG2Q9UGJ0 569 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
ERCC1-203ENST00000340192 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 ELP1O95163 1332 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 LAMA3Q16787 3333 aa16.91■□□□□ 0.3
ERCC1-203ENST00000340192 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
ERCC1-203ENST00000340192 CPA1P15085 419 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 BMP8BP34820 402 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 PPP2R5BQ15173 497 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 STXBP2Q15833 593 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 PRDM5Q9NQX1 630 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-203ENST00000340192 PDLIM7Q9NR12 457 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 TRIOBPQ9H2D6 2365 aa16.9■□□□□ 0.3
ERCC1-203ENST00000340192 GCOM1H8Y6P7 765 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-203ENST00000340192 SLC34A2O95436 690 aa16.89■□□□□ 0.29
ERCC1-203ENST00000340192 POLR2MP0CAP2 368 aa16.89■□□□□ 0.29
ERCC1-203ENST00000340192 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.29
ERCC1-203ENST00000340192 MDM2Q00987 491 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-203ENST00000340192 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
ERCC1-203ENST00000340192 TMTC3Q6ZXV5 915 aa16.89■□□□□ 0.29
ERCC1-203ENST00000340192 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
ERCC1-203ENST00000340192 LAMA2P24043 3122 aaKnown RBP16.88■□□□□ 0.29
ERCC1-203ENST00000340192 A0A0U1RQG5 324 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-203ENST00000340192 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 NKRFO15226 690 aaKnown RBP eCLIP16.88■□□□□ 0.29
ERCC1-203ENST00000340192 ZBTB43O43298 467 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 ZEB2O60315 1214 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 ARIH2O95376 493 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 NR3C2P08235 984 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 CLTBP09497 229 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 FGD1P98174 961 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 TTLL4Q14679 1199 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 BLOC1S2Q6QNY1 142 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 SEPT14Q6ZU15 432 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 FCHSD1Q86WN1 690 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 OR6J1Q8NGC5 347 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 COPS5Q92905 334 aa16.88■□□□□ 0.29
ERCC1-203ENST00000340192 TRIM43Q96BQ3 446 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-203ENST00000340192 LBHD1Q9BQE6 289 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-203ENST00000340192 UBE2OQ9C0C9 1292 aaKnown RBP16.88■□□□□ 0.29
ERCC1-203ENST00000340192 SZT2Q5T011 3432 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 A0A1W2PPC1 479 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 ARVCFO00192 962 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
ERCC1-203ENST00000340192 EIF3JO75822 258 aaKnown RBP16.87■□□□□ 0.29
ERCC1-203ENST00000340192 CABYRO75952 493 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 CPT1AP50416 773 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 CDK7P50613 346 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.29
ERCC1-203ENST00000340192 PGM5Q15124 567 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 RTN1Q16799 776 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 CCDC62Q6P9F0 684 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 Q6ZUG5 572 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 TOX2Q96NM4 488 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 PDCD2LQ9BRP1 358 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
ERCC1-203ENST00000340192 MYH7BA7E2Y1 1941 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 MROH7Q68CQ1 1323 aa16.87■□□□□ 0.29
ERCC1-203ENST00000340192 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-203ENST00000340192 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
ERCC1-203ENST00000340192 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 PSMA5P28066 241 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 FAAP100Q0VG06 881 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 LY6KQ17RY6 165 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
ERCC1-203ENST00000340192 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-203ENST00000340192 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms