RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 GEMIN4P57678 1058 aaKnown RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 TNNC1P63316 161 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 XIAPP98170 497 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 HLTFQ14527 1009 aaKnown RBP eCLIP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ARID5BQ14865 1188 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SAPCD2Q86UD0 394 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 KIRREL3Q8IZU9 778 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ANKK1Q8NFD2 765 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CALML6Q8TD86 181 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 HNRNPABQ99729 332 aaKnown RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 Q9H521 79 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 GID8Q9NWU2 228 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 RASAL2Q9UJF2 1139 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CHMP2BQ9UQN3 213 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 TRIM64CA6NLI5 447 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 HGSO14964 777 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ZBTB7BO15156 539 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 MYCLP1P12525 358 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PPARGP37231 505 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 STAT6P42226 847 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 USP46P62068 366 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 RHOT2Q8IXI1 618 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 FSIP1Q8NA03 581 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 RBBP8NLQ8NC74 664 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 BCL2L13Q9BXK5 485 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PLGRKTQ9HBL7 147 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PCMTD2Q9NV79 361 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 FAIMQ9NVQ4 179 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 KIAA1468Q9P260 1216 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 INTUQ9ULD6 942 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SBNO1A3KN83 1393 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ANKRD62A6NC57 917 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 XPO1O14980 1071 aaKnown RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CYLC1P35663 651 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SERPINB4P48594 390 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PDE6CP51160 858 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 STK38Q15208 465 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ZCWPW2Q504Y3 356 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ARMC3Q5W041 872 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PCNX4Q63HM2 1172 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PPP1R21Q6ZMI0 780 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 NUTM2AQ8IVF1 878 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SPERTQ8NA61 448 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 NEK9Q8TD19 979 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 STK32AQ8WU08 396 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CCT6BQ92526 530 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 GRAMD1AQ96CP6 724 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 TBC1D23Q9NUY8 699 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 RTEL1Q9NZ71 1219 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 RCOR1Q9UKL0 485 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SLC12A4Q9UP95 1085 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ADGRG1Q9Y653 693 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SEMA3EO15041 775 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF12P17014 697 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 PPP2R2AP63151 447 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 GPSM2P81274 684 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CYP4A11Q02928 519 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 KIF22Q14807 665 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SPCS2Q15005 226 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 C15orf59Q2T9L4 293 aaPredicted RBP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 CYP4A22Q5TCH4 519 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 AGAP11Q8TF27 550 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 MAML1Q92585 1016 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 RMDN1Q96DB5 314 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SENP7Q9BQF6 1050 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF304Q9HCX3 659 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 DDX21Q9NR30 783 aaKnown RBP eCLIP4.53□□□□□ -1.68
NEDD4-201ENST00000338963 SLAIN2Q9P270 581 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 WIZO95785 1651 aa4.53□□□□□ -1.68
NEDD4-201ENST00000338963 EIF3FO00303 357 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 TRAPPC3O43617 180 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 BAIAP3O94812 1187 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ATP5DP30049 168 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LSAMPQ13449 338 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CCSAPQ6IQ19 270 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 KIAA1841Q6NSI8 718 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 KANK3Q6NY19 840 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LRRC8CQ8TDW0 803 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 GPR101Q96P66 508 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CDC5LQ99459 802 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LLPHQ9BRT6 129 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 SPATA16Q9BXB7 569 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 HMG20BQ9P0W2 317 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 PIK3CDO00329 1044 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 CYP27B1O15528 508 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ATP2C2O75185 946 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 ASLP04424 464 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 RXRBP28702 533 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 INHBCP55103 352 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 OCRLQ01968 901 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 NEUROD2Q15784 382 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 MARK2Q7KZI7 788 aaKnown RBP4.52□□□□□ -1.69
NEDD4-201ENST00000338963 SCUBE1Q8IWY4 988 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 LSMEM2Q8N112 164 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 MLKLQ8NB16 471 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 TAF4BQ92750 862 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 STMN2Q93045 179 aa4.52□□□□□ -1.69
NEDD4-201ENST00000338963 GPATCH3Q96I76 525 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms