RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 FAM83BQ5T0W9 1011 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 MYMKA6NI61 221 aa18.24■□□□□ 0.51
SCNN1A-202ENST00000338748 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-202ENST00000338748 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
SCNN1A-202ENST00000338748 PDIA5Q14554 519 aa18.24■□□□□ 0.51
SCNN1A-202ENST00000338748 EEF2KMTQ96G04 330 aa18.24■□□□□ 0.51
SCNN1A-202ENST00000338748 PPP1R13BQ96KQ4 1090 aa18.24■□□□□ 0.51
SCNN1A-202ENST00000338748 GCFC2P16383 781 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 PDE4DQ08499 809 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 KIAA0895Q8NCT3 520 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 ARHGEF10LQ9HCE6 1279 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 KCNMB3Q9NPA1 279 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 TAB2Q9NYJ8 693 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 STAT2P52630 851 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 TMEM119Q4V9L6 283 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 TCP11X2Q5H9J9 407 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 FKBP1CQ5VVH2 108 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 CIAPIN1Q6FI81 312 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 LARP4BQ92615 738 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 VPS16Q9H269 839 aa18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 LIMA1Q9UHB6 759 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-202ENST00000338748 KCNJ18B7U540 433 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 KCNJ6P48051 423 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 KCNJ12Q14500 433 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 DYMQ7RTS9 669 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 FAM83AQ86UY5 434 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 CREBRFQ8IUR6 639 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 RAD54LQ92698 747 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 CDK5RAP3Q96JB5 506 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 EXOC1Q9NV70 894 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 PCDHA12Q9UN75 941 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 STAT3P40763 770 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 KRT79Q5XKE5 535 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 LENG9Q96B70 501 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 MBOAT7Q96N66 472 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 GLT8D2Q9H1C3 349 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 STK17AQ9UEE5 414 aa18.22■□□□□ 0.51
SCNN1A-202ENST00000338748 ASTN2O75129 1339 aaPredicted RBP18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 CYP3A7-CYP3A51PA0A087WV96 503 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 LRRC10BA6NIK2 292 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 FAM86B1E9PN63 330 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 FAM86B2P0C5J1 330 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 CYP3A7P24462 503 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 CAP2P40123 477 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 USP11P51784 963 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 PTPN14Q15678 1187 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 CTAGE1Q96RT6 745 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 SYNPO2Q9UMS6 1093 aa18.21■□□□□ 0.51
SCNN1A-202ENST00000338748 MARCH6O60337 910 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 TBC1D12O60347 775 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 MMP14P50281 582 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 PRELPP51888 382 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 RBL2Q08999 1139 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 PRR16Q569H4 304 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 ETNPPLQ8TBG4 499 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 FBXO41Q8TF61 875 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 TBC1D5Q92609 795 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 GOPCQ9HD26 462 aa18.21■□□□□ 0.5
SCNN1A-202ENST00000338748 PSDA5PKW4 1024 aaPredicted RBP18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 PSMA7O14818 248 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 N4BP3O15049 544 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 RASA3Q14644 834 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 CYP2W1Q8TAV3 490 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 CPLX3Q8WVH0 158 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 JDP2Q8WYK2 163 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 KIFC2Q96AC6 838 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 BAG1Q99933 345 aaPredicted RBP18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 MTFR1LQ9H019 292 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
SCNN1A-202ENST00000338748 GYPCP04921 128 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 GTF2F1P35269 517 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 SREBF1P36956 1147 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 AMPD3Q01432 767 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 RASSF7Q02833 373 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 SPIRE1Q08AE8 756 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 GLIS3Q8NEA6 775 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 SRRTQ9BXP5 876 aaKnown RBP18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 POTEB3A0JP26 581 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 SPDYE3A6NKU9 549 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 POTECB2RU33 542 aa18.19■□□□□ 0.5
SCNN1A-202ENST00000338748 H7C1D1 291 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms