RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 BACE2Q9Y5Z0 518 aa5.74□□□□□ -1.49
SKP1-201ENST00000328392 BLACEA4D250 179 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 HRKO00198 91 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 ADCY3O60266 1144 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 ASMTLO95671 621 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 DBHP09172 617 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 ECI1P42126 302 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 ZNF143P52747 638 aaPredicted RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 NCKAP1LP55160 1127 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 CYP4F3Q08477 520 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 HSP90AA2PQ14568 343 aaPredicted RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 CBX2Q14781 532 aaPredicted RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 BICRALQ6AI39 1079 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 GTF2IRD2BQ6EKJ0 949 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 GTF2IRD2Q86UP8 949 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 ZBTB38Q8NAP3 1195 aaPredicted RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 MRGPRX3Q96LB0 322 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 IPO9Q96P70 1041 aaKnown RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 AARSD1Q9BTE6 412 aaKnown RBP5.73□□□□□ -1.49
SKP1-201ENST00000328392 IER2Q9BTL4 223 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 RXFP1Q9HBX9 757 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 PDLIM7Q9NR12 457 aa5.73□□□□□ -1.49
SKP1-201ENST00000328392 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.73□□□□□ -1.49
SKP1-201ENST00000328392 TRAV20A0A0B4J274 112 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 NUAK1O60285 661 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 SNRPB2P08579 225 aaKnown RBP5.72□□□□□ -1.49
SKP1-201ENST00000328392 ZSCAN22P10073 491 aaPredicted RBP5.72□□□□□ -1.49
SKP1-201ENST00000328392 SCRN1Q12765 414 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 PRSS53Q2L4Q9 553 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 PLEKHN1Q494U1 663 aaPredicted RBP5.72□□□□□ -1.49
SKP1-201ENST00000328392 MBLAC2Q68D91 279 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 CIAPIN1Q6FI81 312 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 POMZP3Q6PJE2 187 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 LDHDQ86WU2 507 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 HOMER1Q86YM7 354 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 TRIM59Q8IWR1 403 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 NLGN2Q8NFZ4 835 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 ZSCAN18Q8TBC5 510 aaPredicted RBP5.72□□□□□ -1.49
SKP1-201ENST00000328392 APPBP2Q92624 585 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 CLEC1BQ9P126 229 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
SKP1-201ENST00000328392 RWDD3Q9Y3V2 267 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
SKP1-201ENST00000328392 CADPSQ9ULU8 1353 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 A0A1W2PQJ5 194 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 ZC3H12DA2A288 527 aaKnown RBP5.71□□□□□ -1.5
SKP1-201ENST00000328392 ABLIM1O14639 778 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 N4BP3O15049 544 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 PLS3P13797 630 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 PI3P19957 117 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 TKFCQ3LXA3 575 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 NSMFQ6X4W1 530 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 IGDCC3Q8IVU1 814 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 ZSWIM2Q8NEG5 633 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 MZB1Q8WU39 189 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 COPS5Q92905 334 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 SGSM3Q96HU1 749 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 EXOC2Q96KP1 924 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 EPB41L4AQ9HCS5 686 aaPredicted RBP5.71□□□□□ -1.5
SKP1-201ENST00000328392 GULP1Q9UBP9 304 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 CD2APQ9Y5K6 639 aa5.71□□□□□ -1.5
SKP1-201ENST00000328392 TRBV23-1A0A0A0MS06 115 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 NPHP3-ACAD11A0A0J9YXS1 232 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 ARNTLO00327 626 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 THBDP07204 575 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 PABPC1P11940 636 aaKnown RBP5.7□□□□□ -1.5
SKP1-201ENST00000328392 PAMP19021 973 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 HSD3B2P26439 372 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 MAPKAPK2P49137 400 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 ZNF200P98182 395 aaPredicted RBP5.7□□□□□ -1.5
SKP1-201ENST00000328392 FBLN7Q53RD9 439 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 PAQR3Q6TCH7 311 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 TMEFF1Q8IYR6 380 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 CRACR2BQ8N4Y2 399 aaPredicted RBP5.7□□□□□ -1.5
SKP1-201ENST00000328392 ZNF669Q96BR6 464 aaPredicted RBP5.7□□□□□ -1.5
SKP1-201ENST00000328392 SIGLEC10Q96LC7 697 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 MTA3Q9BTC8 594 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 PCDHA5Q9Y5H7 936 aa5.7□□□□□ -1.5
SKP1-201ENST00000328392 C7orf72A4D263 438 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 F8W031 263 aaPredicted RBP5.69□□□□□ -1.5
SKP1-201ENST00000328392 IRS4O14654 1257 aaPredicted RBP5.69□□□□□ -1.5
SKP1-201ENST00000328392 SRGAP3O43295 1099 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 CLSTN1O94985 981 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 RAPGEF3O95398 923 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 CYBBP04839 570 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 GLI4P10075 376 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 CORO7P57737 925 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 PRR5P85299 388 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 NR1I3Q14994 352 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 INF2Q27J81 1249 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 ZC3H14Q6PJT7 736 aaKnown RBP5.69□□□□□ -1.5
SKP1-201ENST00000328392 USP53Q70EK8 1073 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 AMIGO3Q86WK7 504 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 TMEM145Q8NBT3 493 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 FRS2Q8WU20 508 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 DPF3Q92784 378 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 OSBP2Q969R2 916 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms