RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 KRT24Q2M2I5 525 aa8.15□□□□□ -1.11
CSTF3-201ENST00000323959 FAM126AQ9BYI3 521 aaPredicted RBP8.15□□□□□ -1.11
CSTF3-201ENST00000323959 PDS5AQ29RF7 1337 aaKnown RBP8.14□□□□□ -1.11
CSTF3-201ENST00000323959 SCN10AQ9Y5Y9 1956 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 KCNK5O95279 499 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 CALD1Q05682 793 aaKnown RBP8.14□□□□□ -1.11
CSTF3-201ENST00000323959 KATNBL1Q9H079 304 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 SCUBE2Q9NQ36 999 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 USTQ9Y2C2 406 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 ENO4A6NNW6 628 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 MTHFRP42898 656 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 EVX2Q03828 476 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 PLS1Q14651 629 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 SPTY2D1Q68D10 685 aaPredicted RBP8.14□□□□□ -1.11
CSTF3-201ENST00000323959 ANKRD54Q6NXT1 300 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 SIX5Q8N196 739 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
CSTF3-201ENST00000323959 EMSYQ7Z589 1322 aa8.14□□□□□ -1.11
CSTF3-201ENST00000323959 FOCADQ5VW36 1801 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 APAF1O14727 1248 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 LGR5O75473 907 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 GDF11O95390 407 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 TMPOP42166 694 aaKnown RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 TDGQ13569 410 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 CWF19L2Q2TBE0 894 aaKnown RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 ZNF605Q86T29 641 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 GNL3LQ9NVN8 582 aaKnown RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 RCAN3Q9UKA8 241 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 CHMP3Q9Y3E7 222 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 TRIOO75962 3097 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 TREHO43280 583 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 NRIP1P48552 1158 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 ATF7IPQ6VMQ6 1270 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 DZIP1Q86YF9 867 aaKnown RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 MAML2Q8IZL2 1156 aaPredicted RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 LSM14BQ9BX40 385 aaKnown RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 DENND2AQ9ULE3 1009 aa8.13□□□□□ -1.11
CSTF3-201ENST00000323959 USP9XQ93008 2570 aaPredicted RBP8.13□□□□□ -1.11
CSTF3-201ENST00000323959 ZNF853P0CG23 659 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 SPEM2Q0P670 501 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 DUSP6Q16828 381 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 COL28A1Q2UY09 1125 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 PDE12Q6L8Q7 609 aaKnown RBP8.12□□□□□ -1.11
CSTF3-201ENST00000323959 IL17RAQ96F46 866 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 ZNF594Q96JF6 807 aaPredicted RBP8.12□□□□□ -1.11
CSTF3-201ENST00000323959 SMOC2Q9H3U7 446 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 TRIM35Q9UPQ4 493 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 NOD1Q9Y239 953 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 NBNO60934 754 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 TCTN1Q2MV58 587 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 TPRNQ4KMQ1 711 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 SESTD1Q86VW0 696 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 VGLL2Q8N8G2 317 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 TOP1MTQ969P6 601 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 PPP4R2Q9NY27 417 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 ADAMTS5Q9UNA0 930 aa8.12□□□□□ -1.11
CSTF3-201ENST00000323959 PDE8BO95263 885 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 LDHCP07864 332 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 FGFR2P21802 821 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 GSTO1P78417 241 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
CSTF3-201ENST00000323959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
CSTF3-201ENST00000323959 TBC1D17Q9HA65 648 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 DNAH14Q0VDD8 3507 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 LINC00271P0C7V0 271 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 ZYXQ15942 572 aaKnown RBP8.11□□□□□ -1.11
CSTF3-201ENST00000323959 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 ARMCX2Q7L311 632 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 ADGRD2Q7Z7M1 963 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 TLE6Q9H808 572 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 PLAGL2Q9UPG8 496 aa8.11□□□□□ -1.11
CSTF3-201ENST00000323959 FAM221BA6H8Z2 402 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 LAMTOR5O43504 91 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 ITIH3Q06033 890 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 TMEM132BQ14DG7 1078 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 METTL24Q5JXM2 366 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 LMBR1LQ6UX01 489 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 CELF5Q8N6W0 485 aaKnown RBP8.1□□□□□ -1.11
CSTF3-201ENST00000323959 IFT57Q9NWB7 429 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 GH2P01242 217 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 PRKCSHP14314 528 aaPredicted RBP8.1□□□□□ -1.11
CSTF3-201ENST00000323959 CPT1AP50416 773 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 PURAQ00577 322 aaKnown RBP8.1□□□□□ -1.11
CSTF3-201ENST00000323959 UBE3AQ05086 875 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 CAMK1Q14012 370 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 LINS1Q8NG48 757 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 SIT1Q9Y3P8 196 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 C1QL1O75973 258 aa8.1□□□□□ -1.11
CSTF3-201ENST00000323959 FOXC1Q12948 553 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms