RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TNFRSF8P28908 595 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 TRAPPC10P48553 1259 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 MRPS35P82673 323 aaKnown RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 LBRQ14739 615 aaKnown RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CWF19L2Q2TBE0 894 aaKnown RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 KDM7AQ6ZMT4 941 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 UBE3BQ7Z3V4 1068 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CNBD1Q8NA66 436 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 NEK9Q8TD19 979 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 AGAP11Q8TF27 550 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 XAGE3Q8WTP9 111 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 ATRIPQ8WXE1 791 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 P3H4Q92791 437 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CYFIP2Q96F07 1278 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CTAGE1Q96RT6 745 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 DESI2Q9BSY9 194 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 GREB1LQ9C091 1923 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 GFPT2O94808 682 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 TMCC1O94876 653 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CLTAP09496 248 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CCDC175P0C221 793 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 UQCRFS1P1P0C7P4 283 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 ADAM9Q13443 819 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 NR1I3Q14994 352 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 PPP1R7Q15435 360 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 TTMPQ5BVD1 217 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 RASGRP2Q7LDG7 609 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 SNRNP27Q8WVK2 155 aaKnown RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 LZICQ8WZA0 190 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 NDNQ99608 321 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 MAGEF1Q9HAY2 307 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 PCDH18Q9HCL0 1135 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 LZTFL1Q9NQ48 299 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 ZNHIT6Q9NWK9 470 aaKnown RBP7.33□□□□□ -1.24
ZNF540-201ENST00000316433 CEP131Q9UPN4 1083 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 MROH7-TTC4A0A0A0MT08 1334 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 SPATA31A3Q5VYP0 1347 aa7.33□□□□□ -1.24
ZNF540-201ENST00000316433 ERVV-1B6SEH8 477 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 FAM200BP0CF97 657 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 GHRP10912 638 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 CPA1P15085 419 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 PFKFB1P16118 471 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 FGFR2P21802 821 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ADD2P35612 726 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 PPP1R2P41236 205 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 SEC24CP53992 1094 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 UBASH3AP57075 661 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 GUCY1A3Q02108 690 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 LMNB2Q03252 620 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 SGSM1Q2NKQ1 1148 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 RILPL1Q5EBL4 403 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ZNF569Q5MCW4 686 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 CNNM4Q6P4Q7 775 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 NCCRP1Q6ZVX7 275 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 RIC3Q7Z5B4 369 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 CCDC65Q8IXS2 484 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ERMNQ8TAM6 284 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 TRIM11Q96F44 468 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ANKRD27Q96NW4 1050 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 CDC5LQ99459 802 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ANGEL1Q9UNK9 670 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 RABL2BQ9UNT1 228 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 SLIT2O94813 1529 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 CDK5RAP2Q96SN8 1893 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 EIF4E1BA6NMX2 242 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ABL1P00519 1130 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 LMOD1P29536 600 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 NDUFA8P51970 172 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 HDAC4P56524 1084 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 BPIFB4P59827 614 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 PHEXP78562 749 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 DPCR1Q3MIW9 517 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ALS2CLQ60I27 953 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 CYB5RLQ6IPT4 315 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 SEPT14Q6ZU15 432 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ERICH1Q86X53 443 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 EIF1ADQ8N9N8 165 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 ARL8AQ96BM9 186 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 HVCN1Q96D96 273 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 RNPC3Q96LT9 517 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 MPHOSPH6Q99547 160 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 OXCT2Q9BYC2 517 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 DMAP1Q9NPF5 467 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 LIMA1Q9UHB6 759 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 SRPRBQ9Y5M8 271 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 RBBP6Q7Z6E9 1792 aaKnown RBP7.32□□□□□ -1.24
ZNF540-201ENST00000316433 NAV1Q8NEY1 1877 aa7.32□□□□□ -1.24
ZNF540-201ENST00000316433 STRCQ7RTU9 1775 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 E7EVH7 732 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 MAP4K4O95819 1239 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CCDC166P0CW27 439 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FUT4P22083 530 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 STIP1P31948 543 aaKnown RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 TUBP50607 506 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms