RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PUS3Q9BZE2 481 aaKnown RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 FAM8A1Q9UBU6 413 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 PIK3R2O00459 728 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 CDR2Q01850 454 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 TOGARAM2Q6ZUX3 1019 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 PLCG2P16885 1265 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 NNTQ13423 1086 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 MTRQ99707 1265 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 EPN1Q9Y6I3 576 aaPredicted RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 TUBB4AP04350 444 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 BLVRAP53004 296 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 DHX9Q08211 1270 aaKnown RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 LARGE2Q8N3Y3 721 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 E2F8A0AVK6 867 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 MAFGO15525 162 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 LARGE1O95461 756 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 PMS1P54277 932 aaKnown RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 CCDC197Q8NCU1 140 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 CACTINQ8WUQ7 758 aaKnown RBP13.76□□□□□ -0.21
USP38-201ENST00000307017 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 PARD6BQ9BYG5 372 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
USP38-201ENST00000307017 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 ZC3H18Q86VM9 953 aaKnown RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 ELAC2Q9BQ52 826 aaKnown RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 PACSIN2Q9UNF0 486 aaPredicted RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 ZBED4O75132 1171 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 EFCAB8A8MWE9 144 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 NPR1P16066 1061 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 HNRNPH2P55795 449 aaKnown RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 PI16Q6UXB8 463 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 CTNND1O60716 968 aaKnown RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 NOSTRINQ8IVI9 506 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 COA7Q96BR5 231 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 CCDC138Q96M89 665 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 NFU1Q9UMS0 254 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 ANGPTL3Q9Y5C1 460 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 STK25O00506 426 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 CLCN6P51797 869 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 ABCB6Q9NP58 842 aa13.75□□□□□ -0.21
USP38-201ENST00000307017 ALG13Q9NP73 1137 aaKnown RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 NXF1Q9UBU9 619 aaKnown RBP13.75□□□□□ -0.21
USP38-201ENST00000307017 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 PDE8AO60658 829 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 GDF11O95390 407 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 TSPY1Q01534 308 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 NR5A1Q13285 461 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 LRRC14Q15048 493 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 PHLDB3Q6NSJ2 640 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 CDAN1Q8IWY9 1227 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 A0A0G2JND7 137 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 CALN1Q9BXU9 219 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 IVNS1ABPQ9Y6Y0 642 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 STMN1P16949 149 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
USP38-201ENST00000307017 ASPHQ12797 758 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 RGS9BPQ6ZS82 235 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 FAM178BQ8IXR5 827 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 KBTBD3Q8NAB2 608 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 ATXN7L3BQ96GX2 97 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 UBE2TQ9NPD8 197 aaPredicted RBP13.74□□□□□ -0.21
USP38-201ENST00000307017 FBXL5Q9UKA1 691 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 MAN1B1Q9UKM7 699 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 GRAMD1BQ3KR37 738 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 PLBD2Q8NHP8 589 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 PRKAB2O43741 272 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 EEF1DP29692 281 aaKnown RBP13.74□□□□□ -0.21
USP38-201ENST00000307017 SGO2Q562F6 1265 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 NLRX1Q86UT6 975 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 IFNL3Q8IZI9 196 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 DNAAF3Q8N9W5 541 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 H3BRJ5 948 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 NCK2O43639 380 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 KCNA1Q09470 495 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 BEND6Q5SZJ8 279 aaPredicted RBP13.74□□□□□ -0.21
USP38-201ENST00000307017 ADALQ6DHV7 355 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 KLHL29Q96CT2 875 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
USP38-201ENST00000307017 HEMGNQ9BXL5 484 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 AKT3Q9Y243 479 aa13.74□□□□□ -0.21
USP38-201ENST00000307017 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
USP38-201ENST00000307017 RPRD2Q5VT52 1461 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms