RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 OPLAHO14841 1288 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCG2-201ENST00000305409 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 ADSSL1Q8N142 457 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 RWDD2AQ9UIY3 292 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 PCDHA12Q9UN75 941 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 GREB1LQ9C091 1923 aaPredicted RBP12.78□□□□□ -0.36
SCG2-201ENST00000305409 IDEP14735 1019 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
SCG2-201ENST00000305409 RASA3Q14644 834 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
SCG2-201ENST00000305409 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
SCG2-201ENST00000305409 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 ADD3Q9UEY8 706 aaKnown RBP12.78□□□□□ -0.36
SCG2-201ENST00000305409 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
SCG2-201ENST00000305409 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
SCG2-201ENST00000305409 N4BP3O15049 544 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 CFBP00751 764 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.36
SCG2-201ENST00000305409 RBL2Q08999 1139 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 KRT79Q5XKE5 535 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 TC2NQ8N9U0 490 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 TMX1Q9H3N1 280 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 POLD4Q9HCU8 107 aa12.77□□□□□ -0.36
SCG2-201ENST00000305409 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 MYO1BO43795 1136 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 POLD1P28340 1107 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 PRELPP51888 382 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 STAT2P52630 851 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 ARHGAP4P98171 946 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 TBX2Q13207 712 aaPredicted RBP12.77□□□□□ -0.37
SCG2-201ENST00000305409 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 MTF1Q14872 753 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 LRRC41Q15345 812 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 SV2BQ7L1I2 683 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 IRF2BP1Q8IU81 584 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 AGBL3Q8NEM8 1001 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 LARP4BQ92615 738 aaKnown RBP12.77□□□□□ -0.37
SCG2-201ENST00000305409 PPP1R13BQ96KQ4 1090 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 TRIM47Q96LD4 638 aa12.77□□□□□ -0.37
SCG2-201ENST00000305409 NPHP3-ACAD11A0A0J9YXS1 232 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 POTECB2RU33 542 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 E9PMD0 336 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 FAM86B1E9PN63 330 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 TPM2P07951 284 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 FAM86B2P0C5J1 330 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 GIMAP8Q8ND71 665 aaPredicted RBP12.76□□□□□ -0.37
SCG2-201ENST00000305409 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 DESI2Q9BSY9 194 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 TMX2Q9Y320 296 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 RNF225M0QZC1 329 aaPredicted RBP12.76□□□□□ -0.37
SCG2-201ENST00000305409 MEIS1O00470 390 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 CAP2P40123 477 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 TGFB2P61812 414 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 TMEM139Q8IV31 216 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 KIAA0895Q8NCT3 520 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 KIAA1024Q9UPX6 916 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 COPB1P53618 953 aaKnown RBP12.76□□□□□ -0.37
SCG2-201ENST00000305409 KCNB1Q14721 858 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 RAD54LQ92698 747 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 BAG1Q99933 345 aaPredicted RBP12.76□□□□□ -0.37
SCG2-201ENST00000305409 C7orf25Q9BPX7 421 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
SCG2-201ENST00000305409 CASP14P31944 242 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
SCG2-201ENST00000305409 NAA30Q147X3 362 aaPredicted RBP12.75□□□□□ -0.37
SCG2-201ENST00000305409 TOGARAM2Q6ZUX3 1019 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 DDX12PQ92771 950 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 FEZ1Q99689 392 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 ARID3AQ99856 593 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 RAB34Q9BZG1 259 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 SOWAHDA6NJG2 315 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 PSMA7O14818 248 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 PDIA5Q14554 519 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 FILIP1LQ4L180 1135 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 NCAPH2Q6IBW4 605 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 NLGN2Q8NFZ4 835 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 DUSP9Q99956 384 aaKnown RBP12.75□□□□□ -0.37
SCG2-201ENST00000305409 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
SCG2-201ENST00000305409 A0A0U1RQJ8 604 aa12.74□□□□□ -0.37
SCG2-201ENST00000305409 POTEFA5A3E0 1075 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms