RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 STAT6P42226 847 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 MYL5Q02045 173 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 RRAGBQ5VZM2 374 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 CABP7Q86V35 215 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
TPM3-202ENST00000302206 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 RMND1Q9NWS8 449 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 DDX25Q9UHL0 483 aaKnown RBP13.54□□□□□ -0.24
TPM3-202ENST00000302206 TSKSQ9UJT2 592 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 MRPL11Q9Y3B7 192 aaKnown RBP13.54□□□□□ -0.24
TPM3-202ENST00000302206 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
TPM3-202ENST00000302206 ABCB11O95342 1321 aa13.54□□□□□ -0.24
TPM3-202ENST00000302206 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 TBX3O15119 743 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 CA12O43570 354 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 TDP2O95551 362 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 CYP3A4P08684 503 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 FDX1P10109 184 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 BMP6P22004 513 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 MAP2K2P36507 400 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 SREBF1P36956 1147 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP14P54578 494 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 KARSQ15046 597 aaKnown RBP13.53□□□□□ -0.24
TPM3-202ENST00000302206 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 NBPF12Q5TAG4 269 aaPredicted RBP13.53□□□□□ -0.24
TPM3-202ENST00000302206 ANGEL2Q5VTE6 544 aaKnown RBP13.53□□□□□ -0.24
TPM3-202ENST00000302206 USP17L6PQ6QN14 398 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 FEZ1Q99689 392 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 AS3MTQ9HBK9 375 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 KBTBD4Q9NVX7 518 aa13.53□□□□□ -0.24
TPM3-202ENST00000302206 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 OPLAHO14841 1288 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 SLC37A4O43826 429 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
TPM3-202ENST00000302206 HOXA7P31268 230 aaPredicted RBP13.52□□□□□ -0.25
TPM3-202ENST00000302206 CIITAP33076 1130 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 AFMP43652 599 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 KCNB1Q14721 858 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 Q4G0T1 1027 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 NOL9Q5SY16 702 aaKnown RBP13.52□□□□□ -0.25
TPM3-202ENST00000302206 SAMD3Q8N6K7 520 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 ENOX1Q8TC92 643 aaKnown RBP13.52□□□□□ -0.25
TPM3-202ENST00000302206 CALML4Q96GE6 196 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 STK17AQ9UEE5 414 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 MYH7BA7E2Y1 1941 aa13.52□□□□□ -0.25
TPM3-202ENST00000302206 PP2D1A8MPX8 630 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 TECP42680 631 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 TXKP42681 527 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 SNAP25P60880 206 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 GHRHRQ02643 423 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 SUPT20HL1Q3ZLR7 823 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 USH1GQ495M9 461 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
TPM3-202ENST00000302206 RASSF8Q8NHQ8 419 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 MTRQ99707 1265 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 MMTAG2Q9BU76 263 aaKnown RBP13.51□□□□□ -0.25
TPM3-202ENST00000302206 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
TPM3-202ENST00000302206 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 KCNMB3Q9NPA1 279 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 ADARB2Q9NS39 739 aaKnown RBP13.51□□□□□ -0.25
TPM3-202ENST00000302206 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
TPM3-202ENST00000302206 TNRC18O15417 2968 aaPredicted RBP13.5□□□□□ -0.25
TPM3-202ENST00000302206 GCOM1H8Y6P7 765 aaPredicted RBP13.5□□□□□ -0.25
TPM3-202ENST00000302206 TRAF5O00463 557 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 RPN1P04843 607 aaKnown RBP13.5□□□□□ -0.25
TPM3-202ENST00000302206 ICAM1P05362 532 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 POLR2MP0CAP2 368 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 PLCG1P19174 1290 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 INPP5BP32019 993 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 EPS15P42566 896 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
TPM3-202ENST00000302206 AMPD3Q01432 767 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 DGKZQ13574 1117 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 DHX8Q14562 1220 aaKnown RBP13.5□□□□□ -0.25
TPM3-202ENST00000302206 HYIQ5T013 277 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 HAS1Q92839 578 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 FAM20AQ96MK3 541 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 C7orf25Q9BPX7 421 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms