RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TMED2Q15363 201 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CFAP36Q96G28 342 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 G3BP2Q9UN86 482 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ABCC4O15439 1325 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RINT1Q6NUQ1 792 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SCARA5Q6ZMJ2 495 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CROCCP2Q86T23 111 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 FAM133AQ8N9E0 248 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ACRBPQ8NEB7 543 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DCPSQ96C86 337 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TUBGCP2Q9BSJ2 902 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 INPP5FQ9Y2H2 1132 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 EPN1Q9Y6I3 576 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ZNF804BA4D1E1 1349 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SOS2Q07890 1332 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ATP2B4P23634 1241 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 BRD3Q15059 726 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GDAP1Q8TB36 358 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DDAH1O94760 285 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CRKLP46109 303 aaKnown RBP14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ERFEQ4G0M1 354 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 LRRC8CQ8TDW0 803 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DYNLL2Q96FJ2 89 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PIGSQ96S52 555 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 COL4A3BPQ9Y5P4 624 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SOWAHDA6NJG2 315 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TLR3O15455 904 aaKnown RBP14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GABPB1Q06547 395 aaPredicted RBP14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DPCR1Q3MIW9 517 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DNAJC17Q9NVM6 304 aaKnown RBP14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CYP4F22Q6NT55 531 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ERVV-2B6SEH9 535 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GFPT2O94808 682 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ACTN1P12814 892 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 NR2F2P24468 414 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 EEF1GP26641 437 aaKnown RBP14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HP1BP3Q5SSJ5 553 aaPredicted RBP14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SSH3Q8TE77 659 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TM6SF1Q9BZW5 370 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CARMIL3Q8ND23 1372 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 WDR91A4D1P6 747 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CSRNP1Q96S65 589 aa14.79□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 H2AFZP0C0S5 128 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 KRT3P12035 628 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 H2AFVQ71UI9 128 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GAS2L3Q86XJ1 694 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HAUS1Q96CS2 278 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MARK3P27448 753 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SLC7A5Q01650 507 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CCDC68Q9H2F9 335 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 METTL14Q9HCE5 456 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CD58P19256 250 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MCF2L2Q86YR7 1114 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RPS6KC1Q96S38 1066 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 IWS1Q96ST2 819 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 EPB41L5Q9HCM4 733 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PCDHA4Q9UN74 947 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TBX22Q9Y458 520 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 NR5A1Q13285 461 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DBN1Q16643 649 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 C7orf31Q8N865 590 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PARD3BQ8TEW8 1205 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MAGOHBQ96A72 148 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SPECC1L-ADORA2AF8WAN1 911 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 N4BP1O75113 896 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DDIT3P35638 169 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PEX19P40855 299 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 COG7P83436 770 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DBNLQ9UJU6 430 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MAN1B1Q9UKM7 699 aa14.78□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MAPK4P31152 587 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 FAM133BQ5BKY9 247 aaKnown RBP14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DPP9Q86TI2 863 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 LCORLQ8N3X6 602 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RMDN2Q96LZ7 410 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HOMER3Q9NSC5 361 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ATP8A1Q9Y2Q0 1164 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GOLGA8IPA6NC78 632 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GOLGA8JA6NMD2 632 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MFAP3P55082 362 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CXorf38Q8TB03 319 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SPATA17Q96L03 361 aa14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 NXF1Q9UBU9 619 aaKnown RBP14.77□□□□□ -0.04
CHRFAM7A-201ENST00000299847 EFCAB8A8MWE9 144 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 INO80B-WBP1J3KQ70 363 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RNF8O76064 485 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LONP1P36776 959 aaKnown RBP14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PDE1BQ01064 536 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TBCKQ8TEA7 893 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LARP4BQ92615 738 aaKnown RBP14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 INO80BQ9C086 356 aaPredicted RBP14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SUDS3Q9H7L9 328 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms