RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CYP2D6P10635 497 aa19.45■□□□□ 0.7
CDC42EP3-201ENST00000295324 PPM1KQ8N3J5 372 aa19.45■□□□□ 0.7
CDC42EP3-201ENST00000295324 ACCSQ96QU6 501 aa19.45■□□□□ 0.7
CDC42EP3-201ENST00000295324 MYCP01106 439 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP3-201ENST00000295324 LACTBP83111 547 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP3-201ENST00000295324 FAM83BQ5T0W9 1011 aa19.45■□□□□ 0.7
CDC42EP3-201ENST00000295324 SPP2Q13103 211 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 PEX26Q7Z412 305 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 PPRC1Q5VV67 1664 aaKnown RBP19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 PARP2Q9UGN5 583 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 RHOXF2BP0C7M4 288 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 TYW1BQ6NUM6 668 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 RHOXF2Q9BQY4 288 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 SH3GLB2Q9NR46 395 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 CAMTA2O94983 1202 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 FDX1P10109 184 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 ZNF34Q8IZ26 560 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 ARFGAP2Q8N6H7 521 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 U2AF1L4Q8WU68 220 aaKnown RBP19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 MTA3Q9BTC8 594 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 ARHGEF37A1IGU5 675 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 PDE6CP51160 858 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 FOXO4P98177 505 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 RPS6KA1Q15418 735 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 UBE2SQ16763 222 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 PPP1R21Q6ZMI0 780 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 TMEM47Q9BQJ4 181 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 TMEM206Q9H813 350 aa19.44■□□□□ 0.7
CDC42EP3-201ENST00000295324 ZBTB5O15062 677 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 HOXD10P28358 340 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 NDUFA8P51970 172 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 STRIP1Q5VSL9 837 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 SPATA1Q5VX52 437 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 SND1Q7KZF4 910 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 BPIFB4P59827 614 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 MTERF2Q49AM1 385 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 IFIH1Q9BYX4 1025 aaKnown RBP19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 INO80Q9ULG1 1556 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 CEP104O60308 925 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 MYL1P05976 194 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 HOXA13P31271 388 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 STXBP2Q15833 593 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 C8orf74Q6P047 294 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 ANKRD36BP1Q96IX9 119 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 NLRP7Q8WX94 980 aa19.43■□□□□ 0.7
CDC42EP3-201ENST00000295324 NR5A1Q13285 461 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 BIRC2Q13490 618 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 ZNF827Q17R98 1081 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 RNASELQ05823 741 aaKnown RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 GIMAP8Q8ND71 665 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 CACTINQ8WUQ7 758 aaKnown RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 TRERF1Q96PN7 1200 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 GABPAQ06546 454 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 TMTC3Q6ZXV5 915 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 PIK3CAP42336 1068 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 HADHQ16836 314 aaKnown RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 FEZ2Q9UHY8 353 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 UTP11Q9Y3A2 253 aaKnown RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 CNTNAP4Q9C0A0 1308 aa19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 SNRNP48Q6IEG0 339 aaKnown RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 XPO4Q9C0E2 1151 aaKnown RBP19.42■□□□□ 0.7
CDC42EP3-201ENST00000295324 RFX7Q2KHR2 1363 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 GTF2F1P35269 517 aaKnown RBP eCLIP19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 ALX1Q15699 326 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 METTL23Q86XA0 190 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 NT5C1BQ96P26 610 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 RMDN3Q96TC7 470 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 COPB2P35606 906 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 GPIHBP1Q8IV16 184 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 RIC8AQ9NPQ8 531 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 ASIC3Q9UHC3 531 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 ODF2LQ9ULJ1 636 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 SMIM23A6NLE4 172 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 FASTKD5Q7L8L6 764 aaKnown RBP19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 FRMPD1Q5SYB0 1578 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 FAM196BA6NMK8 535 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 ALDH3A1P30838 453 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 CEP63Q96MT8 703 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 SELENOSQ9BQE4 189 aa19.41■□□□□ 0.7
CDC42EP3-201ENST00000295324 NR2F2P24468 414 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 HOXA7P31268 230 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 PSMC2P35998 433 aaKnown RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 RNASE9P60153 205 aaKnown RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 DHTKD1Q96HY7 919 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 PRPF38AQ8NAV1 312 aaKnown RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 PPM1EQ8WY54 764 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 PTK2Q05397 1052 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 EXOC3L4Q17RC7 722 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 RABL6Q3YEC7 729 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 NSUN6Q8TEA1 469 aaKnown RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 JAK3P52333 1124 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 PDZD4Q76G19 769 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 CNOT7Q9UIV1 285 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms