RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SLFN14P0C7P3 912 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 SAT1P21673 171 aa16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 EEF1GP26641 437 aaKnown RBP16.74■□□□□ 0.27
SHROOM4-201ENST00000289292 APBA1Q02410 837 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 CC2D1AQ6P1N0 951 aaPredicted RBP16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 THOC1Q96FV9 657 aaKnown RBP16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 CUL4BQ13620 913 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 ZNF148Q9UQR1 794 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 SUN1O94901 812 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 NR1D1P20393 614 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 SERPINB6P35237 376 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 NOP56O00567 594 aaKnown RBP16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 LUC7L3O95232 432 aaKnown RBP16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 PCCAP05165 728 aaPredicted RBP16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 PDCLQ13371 301 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 GGCXP38435 758 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 POLA2Q14181 598 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 RESP18Q5W5W9 173 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
SHROOM4-201ENST00000289292 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 SEC31BQ9NQW1 1179 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 ADAM21Q9UKJ8 722 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 RABGAP1Q9Y3P9 1069 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 KIF1BO60333 1816 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 PDE8BO95263 885 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 KIF11P52732 1056 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 CYP4F22Q6NT55 531 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 INTUQ9ULD6 942 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 TACC3Q9Y6A5 838 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 HDLBPQ00341 1268 aaKnown RBP16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 SLFN12Q8IYM2 578 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 DAAM1Q9Y4D1 1078 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 SLC16A2P36021 539 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 XKR9Q5GH70 373 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 PPP4R1Q8TF05 950 aa16.72■□□□□ 0.27
SHROOM4-201ENST00000289292 SGK1O00141 431 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 PLCG1P19174 1290 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 PHLDB3Q6NSJ2 640 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 SARM1Q6SZW1 724 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 TBCKQ8TEA7 893 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 RPS8P62241 208 aaKnown RBP16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 KIF2CQ99661 725 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 SLC24A3Q9HC58 644 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 TYW1Q9NV66 732 aaKnown RBP16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 PLAAQ9Y263 795 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 AFPP02771 609 aaKnown RBP16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 BFSP1Q12934 665 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 MAN2A1Q16706 1144 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 PIH1D3Q9NQM4 214 aaKnown RBP16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 WDR91A4D1P6 747 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 LIG4P49917 911 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 MCTP2Q6DN12 878 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
SHROOM4-201ENST00000289292 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.26
SHROOM4-201ENST00000289292 TTC36A6NLP5 189 aa16.71■□□□□ 0.26
SHROOM4-201ENST00000289292 PGRMC1O00264 195 aaKnown RBP16.71■□□□□ 0.26
SHROOM4-201ENST00000289292 CIAO1O76071 339 aa16.71■□□□□ 0.26
SHROOM4-201ENST00000289292 MAP7Q14244 749 aa16.71■□□□□ 0.26
SHROOM4-201ENST00000289292 COA7Q96BR5 231 aa16.71■□□□□ 0.26
SHROOM4-201ENST00000289292 ERVV-2B6SEH9 535 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 SLC8A3P57103 927 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 PIK3CAP42336 1068 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 GABPAQ06546 454 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 PIGSQ96S52 555 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 ANKFY1Q9P2R3 1169 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 SCYL1Q96KG9 808 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 MAD1L1Q9Y6D9 718 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 EIF3CLB5ME19 914 aaKnown RBP16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 PFDN1O60925 122 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 IL9RQ01113 521 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 EIF3CQ99613 913 aaKnown RBP16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 THAP9Q9H5L6 903 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 METP08581 1390 aa16.7■□□□□ 0.26
SHROOM4-201ENST00000289292 MAGEA9P43362 315 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 YWHAGP61981 247 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 UBE2SQ16763 222 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 FAM98CQ17RN3 349 aaKnown RBP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 DYNLL2Q96FJ2 89 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms