RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 BICDL2A1A5D9 508 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 ABCB4P21439 1286 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 SMTNP53814 917 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 RUFY4Q6ZNE9 571 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 FUKQ8N0W3 1084 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 P2RX5Q93086 422 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 HECW2Q9P2P5 1572 aa17.52■□□□□ 0.4
PRPF40B-201ENST00000261897 H0Y3Z8 333 aa17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 SEMA3EO15041 775 aa17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 EEF1GP26641 437 aaKnown RBP17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 SPATS2Q86XZ4 545 aaKnown RBP17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 CCDC197Q8NCU1 140 aa17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 DNAJC17Q9NVM6 304 aaKnown RBP17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 MYH10P35580 1976 aa17.52■□□□□ 0.39
PRPF40B-201ENST00000261897 EPHB6O15197 1021 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 BRD2P25440 801 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 ERFP50548 548 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 GSCP56915 257 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 NT5DC1Q5TFE4 455 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 TRMT1LQ7Z2T5 733 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 CABP7Q86V35 215 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 LRRC45Q96CN5 670 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 CELF4Q9BZC1 486 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 MYH8P13535 1937 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 A6NNZ2 444 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 PLCG1P19174 1290 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 DYNLL1P63167 89 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 TUBB8Q3ZCM7 444 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 PNMA2Q9UL42 364 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 ITIH6Q6UXX5 1313 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 SIGLEC1Q9BZZ2 1709 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 LGR5O75473 907 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 SCTRP47872 440 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 DCAF17Q5H9S7 520 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 CALML4Q96GE6 196 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 ARHGAP20Q9P2F6 1191 aa17.51■□□□□ 0.39
PRPF40B-201ENST00000261897 USP17L12C9JPN9 530 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 USP17L21D6R901 530 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 DNM1LO00429 736 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 SHOX2O60902 331 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 SPRED3Q2MJR0 410 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 KRT28Q7Z3Y7 464 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 NDST4Q9H3R1 872 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 NOD2Q9HC29 1040 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 HMGB1P1B2RPK0 211 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 NKRFO15226 690 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 PLTPP55058 493 aa17.5■□□□□ 0.39
PRPF40B-201ENST00000261897 ZNF263O14978 683 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 SFMBT2Q5VUG0 894 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 TSG101Q99816 390 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 SH3GL2Q99962 352 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 FSBPO95073 299 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 RASGRF1Q13972 1273 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 CCDC50Q8IVM0 306 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 ARPP21Q9UBL0 812 aaPredicted RBP17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 DCDC2CA8MYV0 355 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 MMEP08473 750 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 CCNHP51946 323 aaPredicted RBP17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 MMGT1Q8N4V1 131 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 PRCCQ92733 491 aaPredicted RBP17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 KLHL29Q96CT2 875 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 ZSCAN10Q96SZ4 725 aaPredicted RBP17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 LEMD3Q9Y2U8 911 aa17.49■□□□□ 0.39
PRPF40B-201ENST00000261897 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 GSG1L2A8MUP6 293 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 ARMC3Q5W041 872 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 MTRQ99707 1265 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 PACSIN1Q9BY11 444 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 HSD17B3P37058 310 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 CAPRIN2Q6IMN6 1127 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 IRF2BP1Q8IU81 584 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 GDAP1Q8TB36 358 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 RAPGEF5Q92565 580 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 DNAJC7Q99615 494 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 INTS9Q9NV88 658 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 SALL4Q9UJQ4 1053 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 JCADQ9P266 1359 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 UQCRFS1P1P0C7P4 283 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 KLRC1P26715 233 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 NAPAP54920 295 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 PPP2R2AP63151 447 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 KCNB1Q14721 858 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 PREPLQ4J6C6 727 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 ZFYVE27Q5T4F4 411 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms