RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 FAM161BQ96MY7 647 aa4.81□□□□□ -1.64
CDRT1-201ENST00000261644 PWWP2AQ96N64 755 aa4.81□□□□□ -1.64
CDRT1-201ENST00000261644 PCDHB12Q9Y5F1 795 aa4.81□□□□□ -1.64
CDRT1-201ENST00000261644 EIF2AK4Q9P2K8 1649 aaKnown RBP4.81□□□□□ -1.64
CDRT1-201ENST00000261644 MAGI1Q96QZ7 1491 aaPredicted RBP4.81□□□□□ -1.64
CDRT1-201ENST00000261644 KANK1Q14678 1352 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 UNCXA6NJT0 531 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 FFAR3O14843 346 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 BUB1BO60566 1050 aaPredicted RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 TSPY4P0CV99 314 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 TSPY10P0CW01 314 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 NME1P15531 152 aaKnown RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 PFKLP17858 780 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 POLR2BP30876 1174 aaKnown RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 TARBP2Q15633 366 aaKnown RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 INTS3Q68E01 1043 aaKnown RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 GGNQ86UU5 652 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 NUP43Q8NFH3 380 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 ZNF428Q96B54 188 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 RNF38Q9H0F5 515 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 VTI1BQ9UEU0 232 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 CDK13Q14004 1512 aaKnown RBP4.8□□□□□ -1.64
CDRT1-201ENST00000261644 ABCC2Q92887 1545 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 MAGI2Q86UL8 1455 aa4.8□□□□□ -1.64
CDRT1-201ENST00000261644 NUP155O75694 1391 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 ABCA8O94911 1581 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 MAPK8IP3Q9UPT6 1336 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 MINDY4BA8MYZ0 360 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 TLR3O15455 904 aaKnown RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 CYBBP04839 570 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 CRKP46108 304 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 HTRA3P83110 453 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 SLFN5Q08AF3 891 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 AUHQ13825 339 aaKnown RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 MRPL58Q14197 206 aaKnown RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 KIR3DS1Q14943 382 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 VWA3BQ502W6 1294 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 RTP2Q5QGT7 225 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 ZC3H14Q6PJT7 736 aaKnown RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 CYP2R1Q6VVX0 501 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 TMEM192Q8IY95 271 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 TAB3Q8N5C8 712 aaPredicted RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 SMARCC1Q92922 1105 aaPredicted RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 MRRFQ96E11 262 aaKnown RBP4.79□□□□□ -1.64
CDRT1-201ENST00000261644 IMPACTQ9P2X3 320 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 MRC2Q9UBG0 1479 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 C9orf84Q5VXU9 1444 aa4.79□□□□□ -1.64
CDRT1-201ENST00000261644 UNC13BO14795 1591 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 CGNL1Q0VF96 1302 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 ZNF644Q9H582 1327 aaPredicted RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 GRIN2AQ12879 1464 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 PLA2R1Q13018 1463 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 SH3D21A4FU49 640 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 PLEKHD1A6NEE1 506 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 NUDT19A8MXV4 375 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 CT47B1P0C2W7 299 aaPredicted RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 MSL3P1P0C860 447 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 TMF1P82094 1093 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 MVKQ03426 396 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 L1TD1Q5T7N2 865 aaKnown RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 HLA-DQA1Q5Y7H0 255 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 PAQR3Q6TCH7 311 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 SLITRK4Q8IW52 837 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 SYT8Q8NBV8 401 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 NLGN2Q8NFZ4 835 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 ZNF296Q8WUU4 475 aaPredicted RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 DHRS1Q96LJ7 313 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 SLC6A18Q96N87 628 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 JMJD8Q96S16 334 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 POLR3GLQ9BT43 218 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 MKRN2Q9H000 416 aaKnown RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 AP5S1Q9NUS5 200 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 GFOD1Q9NXC2 390 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 MYRFQ9Y2G1 1151 aa4.78□□□□□ -1.64
CDRT1-201ENST00000261644 PRG4Q92954 1404 aaPredicted RBP4.78□□□□□ -1.64
CDRT1-201ENST00000261644 KIAA1210Q9ULL0 1709 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 FAM135AQ9P2D6 1515 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 USP19O94966 1318 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 WDR7Q9Y4E6 1490 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 IQGAP3Q86VI3 1631 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 FSD2A1L4K1 749 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 SHOXO15266 292 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 DBHP09172 617 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 KCNC1P48547 511 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 ZNF165P49910 485 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 SLURP1P55000 103 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 VMACQ2NL98 169 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 ZXDCQ2QGD7 858 aaPredicted RBP4.77□□□□□ -1.65
CDRT1-201ENST00000261644 CRTC3Q6UUV7 619 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 LIPIQ6XZB0 460 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 SAPCD2Q86UD0 394 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 C7orf61Q8IZ16 206 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 NT5C1AQ9BXI3 368 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 SLC12A9Q9BXP2 914 aa4.77□□□□□ -1.65
CDRT1-201ENST00000261644 ADAM7Q9H2U9 754 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms