RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SENP2Q9HC62 589 aa22.16■■□□□ 1.14
TM6SF1-201ENST00000258909 U3KPZ7 1027 aaPredicted RBP22.16■■□□□ 1.14
TM6SF1-201ENST00000258909 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 GRXCR1A8MXD5 290 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 B4DLN1 442 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 MRPL12P52815 198 aaKnown RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 SEPT14Q6ZU15 432 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 MCF2L2Q86YR7 1114 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 MYLIPQ8WY64 445 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 NOC4LQ9BVI4 516 aaKnown RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 ALDH8A1Q9H2A2 487 aaPredicted RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 GPHNQ9NQX3 736 aaPredicted RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 TRMT13Q9NUP7 481 aaKnown RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 MAD2L2Q9UI95 211 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 MRPL11Q9Y3B7 192 aaKnown RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 PRUNE2Q8WUY3 3088 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 IFIT3O14879 490 aaKnown RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 SGSM2O43147 1006 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 CFBP00751 764 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 NSUN6Q8TEA1 469 aaKnown RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 RMDN3Q96TC7 470 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 MTG1Q9BT17 334 aaPredicted RBP22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 IL23AQ9NPF7 189 aa22.15■■□□□ 1.14
TM6SF1-201ENST00000258909 CUL9Q8IWT3 2517 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 E7EWF7 191 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 NKRFO15226 690 aaKnown RBP eCLIP22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 PPP1R11O60927 126 aaPredicted RBP22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 CYP2C9P11712 490 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 EIF2AK2P19525 551 aaKnown RBP22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 DNAJB2P25686 324 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 TTLL4Q14679 1199 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 FAM47CQ5HY64 1035 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 STOX1Q6ZVD7 989 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 AMNQ9BXJ7 453 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 SEZ6LQ9BYH1 1024 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 WNT8AQ9H1J5 351 aa22.14■■□□□ 1.13
TM6SF1-201ENST00000258909 PALM3A6NDB9 673 aaPredicted RBP22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 A6NJR5 290 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 DLL1O00548 723 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 OPLAHO14841 1288 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 CHMP4BP1P59074 171 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 LY6KQ17RY6 165 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 SLC35G1Q2M3R5 365 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 NBPF20Q3BBV1 942 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 BRDTQ58F21 947 aaPredicted RBP22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 ARHGEF16Q5VV41 709 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 PSRC1Q6PGN9 363 aaPredicted RBP22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 RALYLQ86SE5 291 aaKnown RBP22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 HOMER1Q86YM7 354 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 SCLYQ96I15 445 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 KIAA1217Q5T5P2 1943 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 SCN10AQ9Y5Y9 1956 aa22.13■■□□□ 1.13
TM6SF1-201ENST00000258909 PBX2P40425 430 aa22.12■■□□□ 1.13
TM6SF1-201ENST00000258909 RASIP1Q5U651 963 aa22.12■■□□□ 1.13
TM6SF1-201ENST00000258909 CCDC62Q6P9F0 684 aa22.12■■□□□ 1.13
TM6SF1-201ENST00000258909 CXXC1Q9P0U4 656 aaPredicted RBP22.12■■□□□ 1.13
TM6SF1-201ENST00000258909 ZBTB5O15062 677 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 GRM4Q14833 912 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 STXBP2Q15833 593 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 OTOP2Q7RTS6 562 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 NCOA7Q8NI08 942 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 AFG1LQ8WV93 481 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 MTMR8Q96EF0 704 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 PIGSQ96S52 555 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 PCDHA1Q9Y5I3 950 aa22.11■■□□□ 1.13
TM6SF1-201ENST00000258909 CHD9Q3L8U1 2897 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 ERICH2A1L162 156 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 FGBP02675 491 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 GRIN2CQ14957 1233 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 WTAPQ15007 396 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 MAP4K1Q92918 833 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 IWS1Q96ST2 819 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 PBX4Q9BYU1 374 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 MAF1Q9H063 256 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 PXMP2Q9NR77 195 aa22.1■■□□□ 1.13
TM6SF1-201ENST00000258909 HOXA13P31271 388 aaPredicted RBP22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 HSD17B4P51659 736 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 ANTXR2P58335 489 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 HERVK_113Q902F9 699 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 TIFAQ96CG3 184 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 RBM8AQ9Y5S9 174 aaKnown RBP22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 MYO9BQ13459 2157 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 SCN5AQ14524 2016 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 KPNA6O60684 536 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 GH1P01241 217 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 NR3C2P08235 984 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 SUPT20HL2P0C7V6 817 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 FOSL2P15408 326 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 ARHGAP1Q07960 439 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 TMEM67Q5HYA8 995 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 MAFAQ8NHW3 353 aaPredicted RBP22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 PIBF1Q8WXW3 757 aa22.09■■□□□ 1.13
TM6SF1-201ENST00000258909 MYH7BA7E2Y1 1941 aa22.08■■□□□ 1.13
TM6SF1-201ENST00000258909 TMEM265A0A087WTH1 108 aa22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 CYTH3O43739 400 aa22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 MYCLP12524 364 aaPredicted RBP22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 TROAPQ12815 778 aa22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 SART3Q15020 963 aaKnown RBP22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 VWCEQ96DN2 955 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms