RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 NELFCDQ8IXH7 590 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 CSGALNACT2Q8N6G5 542 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 GLIS3Q8NEA6 775 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 CYP2W1Q8TAV3 490 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 PCDHA12Q9UN75 941 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 HNRNPH2P55795 449 aaKnown RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 STIM1Q13586 685 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 NT5DC1Q5TFE4 455 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 KCNK18Q7Z418 384 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 GLIS2Q9BZE0 524 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 MAGEC2Q9UBF1 373 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 ERCC5P28715 1186 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 MTIF2P46199 727 aaKnown RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 ETF1P62495 437 aaKnown RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 FAM83BQ5T0W9 1011 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 TANGO6Q9C0B7 1094 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 MYH1P12882 1939 aa16.37■□□□□ 0.21
TRAFD1-201ENST00000257604 E9PMD0 336 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 KIF2AO00139 706 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 ZNF18P17022 549 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 NCAPH2Q6IBW4 605 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 KIAA1024Q9UPX6 916 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 PSMA7O14818 248 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 TMCO3Q6UWJ1 677 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 SV2BQ7L1I2 683 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 TFR2Q9UP52 801 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 B4DLN1 442 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 AKR1B15C9JRZ8 316 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 DDX39AO00148 427 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 KLK7P49862 253 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 FXR1P51114 621 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 GALNT17Q6IS24 598 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
TRAFD1-201ENST00000257604 ADAMTSL1Q8N6G6 1762 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 SPDYE3A6NKU9 549 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 TC2NQ8N9U0 490 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 KIAA1551Q9HCM1 1747 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 POTECB2RU33 542 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 TPM1P09493 284 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 BAG6P46379 1132 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 SIAH1Q8IUQ4 282 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 SPATA20Q8TB22 786 aa16.35■□□□□ 0.21
TRAFD1-201ENST00000257604 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 EGFRP00533 1210 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 BMP3P12645 472 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 COPB1P53618 953 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 NR1I3Q14994 352 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 ECM1Q16610 540 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 MMTAG2Q9BU76 263 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 TRIM9Q9C026 710 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 NIM1KQ8IY84 436 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 WDR24Q96S15 920 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 PPP2R2CQ9Y2T4 447 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 MYMKA6NI61 221 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 ANKRD65E5RJM6 399 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 TRIM65Q6PJ69 517 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 ACRBPQ8NEB7 543 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 LARP4BQ92615 738 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 PUF60Q9UHX1 559 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 HDAC9Q9UKV0 1011 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 NAV1Q8NEY1 1877 aa16.34■□□□□ 0.21
TRAFD1-201ENST00000257604 KRT9P35527 623 aa16.33■□□□□ 0.21
TRAFD1-201ENST00000257604 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.21
TRAFD1-201ENST00000257604 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.21
TRAFD1-201ENST00000257604 DAGLBQ8NCG7 672 aa16.33■□□□□ 0.21
TRAFD1-201ENST00000257604 ANO3Q9BYT9 981 aa16.33■□□□□ 0.21
TRAFD1-201ENST00000257604 ADD3Q9UEY8 706 aaKnown RBP16.33■□□□□ 0.21
TRAFD1-201ENST00000257604 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.25e-7■■■■■ 26.8
TRAFD1-201ENST00000257604 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 POTEGQ6S5H5 508 aa16.33■□□□□ 0.2
TRAFD1-201ENST00000257604 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms