RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.24
MBD4-201ENST00000249910 SRRTQ9BXP5 876 aaKnown RBP16.52■□□□□ 0.24
MBD4-201ENST00000249910 SLC39A2Q9NP94 309 aa16.52■□□□□ 0.24
MBD4-201ENST00000249910 HDAC9Q9UKV0 1011 aa16.52■□□□□ 0.24
MBD4-201ENST00000249910 PCNTO95613 3336 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 MYMKA6NI61 221 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 NKRFO15226 690 aaKnown RBP eCLIP16.52■□□□□ 0.23
MBD4-201ENST00000249910 EGFRP00533 1210 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 KCNB1Q14721 858 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 NAA30Q147X3 362 aaPredicted RBP16.52■□□□□ 0.23
MBD4-201ENST00000249910 MTF1Q14872 753 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 AMNQ9BXJ7 453 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 ANO3Q9BYT9 981 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 GLIS2Q9BZE0 524 aaPredicted RBP16.52■□□□□ 0.23
MBD4-201ENST00000249910 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.23
MBD4-201ENST00000249910 SMCHD1A6NHR9 2005 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
MBD4-201ENST00000249910 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
MBD4-201ENST00000249910 CASP14P31944 242 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 KRT79Q5XKE5 535 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 LARP4BQ92615 738 aaKnown RBP16.51■□□□□ 0.23
MBD4-201ENST00000249910 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 CTAGE1Q96RT6 745 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 DESI2Q9BSY9 194 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 EXOC1Q9NV70 894 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 CNTNAP1P78357 1384 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 LRRC10BA6NIK2 292 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 PBX1P40424 430 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 STAT3P40763 770 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 FILIP1LQ4L180 1135 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 FBXO11Q86XK2 927 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 CYP2W1Q8TAV3 490 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 FAM151AQ8WW52 585 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 TRIM47Q96LD4 638 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 PRR12Q9ULL5 1215 aa16.51■□□□□ 0.23
MBD4-201ENST00000249910 WNT10BO00744 389 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 IDEP14735 1019 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 ERCC3P19447 782 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 FXR1P51114 621 aaKnown RBP eCLIP16.5■□□□□ 0.23
MBD4-201ENST00000249910 PDIA5Q14554 519 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 PRR16Q569H4 304 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 FAM83BQ5T0W9 1011 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 KIAA0895Q8NCT3 520 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 TBC1D5Q92609 795 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 C7orf25Q9BPX7 421 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 CUEDC2Q9H467 287 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
MBD4-201ENST00000249910 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
MBD4-201ENST00000249910 SOWAHDA6NJG2 315 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 PSMA7O14818 248 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 OPLAHO14841 1288 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 MYL1P05976 194 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.23
MBD4-201ENST00000249910 COPB1P53618 953 aaKnown RBP16.5■□□□□ 0.23
MBD4-201ENST00000249910 DMTNQ08495 405 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 SLC30A10Q6XR72 485 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 ARID3AQ99856 593 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 RAB34Q9BZG1 259 aa16.5■□□□□ 0.23
MBD4-201ENST00000249910 ZNF646O15015 1829 aaPredicted RBP16.49■□□□□ 0.23
MBD4-201ENST00000249910 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
MBD4-201ENST00000249910 GYPCP04921 128 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 SSBP05455 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
MBD4-201ENST00000249910 AMPD3Q01432 767 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 RAD51AP2Q09MP3 1159 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 ORC2Q13416 577 aaPredicted RBP16.49■□□□□ 0.23
MBD4-201ENST00000249910 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 PIM2Q9P1W9 311 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 LIMA1Q9UHB6 759 aaKnown RBP16.49■□□□□ 0.23
MBD4-201ENST00000249910 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 PAXBP1Q9Y5B6 917 aa16.49■□□□□ 0.23
MBD4-201ENST00000249910 H7C1D1 291 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 ARHGAP6O43182 974 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 UBXN1Q04323 297 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 STIM1Q13586 685 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 PPFIBP1Q86W92 1011 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 CSGALNACT2Q8N6G5 542 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 DDX12PQ92771 950 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
MBD4-201ENST00000249910 MYH7BA7E2Y1 1941 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 FAM86B1E9PN63 330 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 FAM86B2P0C5J1 330 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 STAT2P52630 851 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 ZNF710Q8N1W2 664 aa16.48■□□□□ 0.23
MBD4-201ENST00000249910 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
MBD4-201ENST00000249910 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms