RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CCDC47Q96A33 483 aaKnown RBP17.63■□□□□ 0.41
LRFN1-201ENST00000248668 ZDHHC15Q96MV8 337 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 RIC8AQ9NPQ8 531 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 PCDHA1Q9Y5I3 950 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 LRRC10BA6NIK2 292 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 TFRCP02786 760 aaKnown RBP17.63■□□□□ 0.41
LRFN1-201ENST00000248668 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
LRFN1-201ENST00000248668 SYCP1Q15431 976 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 TAF3Q5VWG9 929 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 KIAA0895Q8NCT3 520 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 OGFRQ9NZT2 677 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 PLSCR1O15162 318 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 MTIF2P46199 727 aaKnown RBP17.62■□□□□ 0.41
LRFN1-201ENST00000248668 P2RX5Q93086 422 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 JAG1P78504 1218 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 ICA1Q05084 483 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 GPATCH4Q5T3I0 446 aaKnown RBP17.62■□□□□ 0.41
LRFN1-201ENST00000248668 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 LARP4BQ92615 738 aaKnown RBP17.62■□□□□ 0.41
LRFN1-201ENST00000248668 TUBGCP2Q9BSJ2 902 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 KRT79Q5XKE5 535 aa17.62■□□□□ 0.41
LRFN1-201ENST00000248668 CNOT6LQ96LI5 555 aaKnown RBP17.62■□□□□ 0.41
LRFN1-201ENST00000248668 CLRN2A0PK11 232 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 C21orf2O43822 256 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 MRPL12P52815 198 aaKnown RBP17.61■□□□□ 0.41
LRFN1-201ENST00000248668 CDC37Q16543 378 aaPredicted RBP17.61■□□□□ 0.41
LRFN1-201ENST00000248668 ZNF569Q5MCW4 686 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 UBXN4Q92575 508 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 PDGFDQ9GZP0 370 aaPredicted RBP17.61■□□□□ 0.41
LRFN1-201ENST00000248668 PI4KBQ9UBF8 816 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 STAT3P40763 770 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
LRFN1-201ENST00000248668 AMPD3Q01432 767 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 STRIP1Q5VSL9 837 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 HAS1Q92839 578 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 C7orf25Q9BPX7 421 aa17.61■□□□□ 0.41
LRFN1-201ENST00000248668 COL11A2P13942 1736 aaPredicted RBP17.61■□□□□ 0.41
LRFN1-201ENST00000248668 TEX35Q5T0J7 233 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 ZNF397Q8NF99 534 aaPredicted RBP17.6■□□□□ 0.41
LRFN1-201ENST00000248668 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
LRFN1-201ENST00000248668 TRIM10Q9UDY6 481 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 SCN9AQ15858 1988 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 GOLGA6L9A6NEM1 432 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 LGALS16A8MUM7 142 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 TCP10L2B9ZVM9 353 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 GH2P01242 217 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 CCNE1P24864 410 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 KIFC2Q96AC6 838 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 CUEDC2Q9H467 287 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 AGPAT5Q9NUQ2 364 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 TRIM21P19474 475 aaKnown RBP17.6■□□□□ 0.41
LRFN1-201ENST00000248668 TBC1D8BQ0IIM8 1120 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 SIAH1Q8IUQ4 282 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
LRFN1-201ENST00000248668 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
LRFN1-201ENST00000248668 SCAF8Q9UPN6 1271 aaKnown RBP17.6■□□□□ 0.41
LRFN1-201ENST00000248668 ITIH6Q6UXX5 1313 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 DDX12PQ92771 950 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 CCDC17Q96LX7 622 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 ST7Q9NRC1 585 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 F5H6K3 240 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 MYL1P05976 194 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 KLRC3Q07444 240 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 DHTKD1Q96HY7 919 aaPredicted RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 FEZ1Q99689 392 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 NOC4LQ9BVI4 516 aaKnown RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 ZHX3Q9H4I2 956 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 THAP9Q9H5L6 903 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 LUC7L2Q9Y383 392 aaKnown RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 E9PMD0 336 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 ABCB5Q2M3G0 1257 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 KANSL2Q9H9L4 492 aa17.59■□□□□ 0.41
LRFN1-201ENST00000248668 PUF60Q9UHX1 559 aaKnown RBP17.59■□□□□ 0.41
LRFN1-201ENST00000248668 NPHP3-ACAD11A0A0J9YXS1 232 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 KIF5CO60282 957 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 RAD17O75943 681 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 TUBB4AP04350 444 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 EEF1GP26641 437 aaKnown RBP17.58■□□□□ 0.41
LRFN1-201ENST00000248668 HOXA13P31271 388 aaPredicted RBP17.58■□□□□ 0.41
LRFN1-201ENST00000248668 PPP2R3AQ06190 1150 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 CNNM4Q6P4Q7 775 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 CYP26C1Q6V0L0 522 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 CSRNP1Q96S65 589 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 P2RX7Q99572 595 aaKnown RBP17.58■□□□□ 0.41
LRFN1-201ENST00000248668 POLD4Q9HCU8 107 aa17.58■□□□□ 0.41
LRFN1-201ENST00000248668 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
LRFN1-201ENST00000248668 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
LRFN1-201ENST00000248668 SLC30A10Q6XR72 485 aa17.58■□□□□ 0.4
LRFN1-201ENST00000248668 FLAD1Q8NFF5 587 aa17.58■□□□□ 0.4
LRFN1-201ENST00000248668 RAD54LQ92698 747 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms