RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 NT5DC1Q5TFE4 455 aa15.03■□□□□ -0
USP5-201ENST00000229268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.03■□□□□ -0
USP5-201ENST00000229268 GPIHBP1Q8IV16 184 aa15.03■□□□□ -0
USP5-201ENST00000229268 HAS1Q92839 578 aa15.03■□□□□ -0
USP5-201ENST00000229268 MYH4Q9Y623 1939 aa15.03■□□□□ -0
USP5-201ENST00000229268 GMCL1Q96IK5 515 aa15.03■□□□□ -0
USP5-201ENST00000229268 KIAA1024Q9UPX6 916 aa15.03■□□□□ -0
USP5-201ENST00000229268 E9PMD0 336 aa15.02■□□□□ -0
USP5-201ENST00000229268 H7C1D1 291 aa15.02■□□□□ -0
USP5-201ENST00000229268 DDX39AO00148 427 aaKnown RBP15.02■□□□□ -0
USP5-201ENST00000229268 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
USP5-201ENST00000229268 ASNSP08243 561 aa15.02■□□□□ -0
USP5-201ENST00000229268 PTGER2P43116 358 aa15.02■□□□□ -0
USP5-201ENST00000229268 MTMR2Q13614 643 aa15.02■□□□□ -0
USP5-201ENST00000229268 ARMCX5Q6P1M9 558 aa15.02■□□□□ -0
USP5-201ENST00000229268 GMCL1P1Q8NEA9 526 aa15.02■□□□□ -0
USP5-201ENST00000229268 TSC1Q92574 1164 aa15.02■□□□□ -0
USP5-201ENST00000229268 MTMR9Q96QG7 549 aa15.02■□□□□ -0
USP5-201ENST00000229268 VCPKMTQ9H867 229 aa15.02■□□□□ -0
USP5-201ENST00000229268 TAB2Q9NYJ8 693 aa15.02■□□□□ -0
USP5-201ENST00000229268 POTEB3A0JP26 581 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 POTECB2RU33 542 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 FLOT1O75955 427 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 ALAS1P13196 640 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 PMS1P54277 932 aaKnown RBP15.02□□□□□ -0.01
USP5-201ENST00000229268 POTEBQ6S5H4 581 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 SPATA20Q8TB22 786 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 INTS13Q9NVM9 706 aa15.02□□□□□ -0.01
USP5-201ENST00000229268 CTDP1Q9Y5B0 961 aaPredicted RBP15.02□□□□□ -0.01
USP5-201ENST00000229268 NPHP3-ACAD11A0A0J9YXS1 232 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 FAM86B1E9PN63 330 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 OFD1O75665 1012 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 DDNO94850 711 aaPredicted RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 FAM86B2P0C5J1 330 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 STK4Q13043 487 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 GRB10Q13322 594 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 FAM177A1Q8N128 213 aaPredicted RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 ENOX1Q8TC92 643 aaKnown RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 UPF1Q92900 1129 aaKnown RBP eCLIP15.01□□□□□ -0.012e-10■■■■■ 46.8
USP5-201ENST00000229268 WRNIP1Q96S55 665 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 TMX1Q9H3N1 280 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 EXOC1Q9NV70 894 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 LAD1O00515 517 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 PAK1Q13153 545 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 SV2BQ7L1I2 683 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 CCDC125Q86Z20 511 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 TRIML1Q8N9V2 468 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 MTMR8Q96EF0 704 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 RAB34Q9BZG1 259 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 FHDC1Q9C0D6 1143 aaPredicted RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 CCSER1Q9C0I3 900 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 RAVER2Q9HCJ3 691 aaKnown RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 GGA3Q9NZ52 723 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 TPM3P06753 285 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 PRPHP41219 470 aa15.01□□□□□ -0.01
USP5-201ENST00000229268 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.01□□□□□ -0.01
USP5-201ENST00000229268 OPLAHO14841 1288 aa15□□□□□ -0.01
USP5-201ENST00000229268 KRT18P05783 430 aaKnown RBP15□□□□□ -0.01
USP5-201ENST00000229268 CLK2P49760 499 aaKnown RBP15□□□□□ -0.01
USP5-201ENST00000229268 SPATA1Q5VX52 437 aa15□□□□□ -0.01
USP5-201ENST00000229268 FAM83AQ86UY5 434 aa15□□□□□ -0.01
USP5-201ENST00000229268 GLIS3Q8NEA6 775 aa15□□□□□ -0.01
USP5-201ENST00000229268 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
USP5-201ENST00000229268 PURBQ96QR8 312 aaKnown RBP15□□□□□ -0.01
USP5-201ENST00000229268 CCPG1Q9ULG6 757 aa15□□□□□ -0.01
USP5-201ENST00000229268 POTEFA5A3E0 1075 aa15□□□□□ -0.01
USP5-201ENST00000229268 N4BP3O15049 544 aa15□□□□□ -0.01
USP5-201ENST00000229268 POTEIP0CG38 1075 aa15□□□□□ -0.01
USP5-201ENST00000229268 TNFAIP1Q13829 316 aa15□□□□□ -0.01
USP5-201ENST00000229268 POTEGQ6S5H5 508 aa15□□□□□ -0.01
USP5-201ENST00000229268 POTEEQ6S8J3 1075 aa15□□□□□ -0.01
USP5-201ENST00000229268 LDHDQ86WU2 507 aa15□□□□□ -0.01
USP5-201ENST00000229268 IGSF22Q8N9C0 903 aa15□□□□□ -0.01
USP5-201ENST00000229268 PNMA5Q96PV4 448 aa15□□□□□ -0.01
USP5-201ENST00000229268 TRIM9Q9C026 710 aa15□□□□□ -0.01
USP5-201ENST00000229268 CD2APQ9Y5K6 639 aa15□□□□□ -0.01
USP5-201ENST00000229268 MYMKA6NI61 221 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 CBFA2T2O43439 604 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 ZNF658Q5TYW1 1059 aaPredicted RBP14.99□□□□□ -0.01
USP5-201ENST00000229268 LARP4BQ92615 738 aaKnown RBP14.99□□□□□ -0.01
USP5-201ENST00000229268 SRRTQ9BXP5 876 aaKnown RBP14.99□□□□□ -0.01
USP5-201ENST00000229268 ZHX2Q9Y6X8 837 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 PEX10O60683 326 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 HOOK2Q96ED9 719 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 AK8Q96MA6 479 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 TEPSINQ96N21 525 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 BLOC1S4Q9NUP1 217 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 KBTBD4Q9NVX7 518 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 SORBS3O60504 671 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 CDC25BP30305 580 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 PABPC4Q13310 644 aaKnown RBP eCLIP14.99□□□□□ -0.014e-6■□□□□ 9
USP5-201ENST00000229268 RGL1Q9NZL6 768 aa14.99□□□□□ -0.01
USP5-201ENST00000229268 NFIBO00712 420 aa14.98□□□□□ -0.01
USP5-201ENST00000229268 ERCC5P28715 1186 aaPredicted RBP14.98□□□□□ -0.01
USP5-201ENST00000229268 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
USP5-201ENST00000229268 NSMFQ6X4W1 530 aa14.98□□□□□ -0.01
USP5-201ENST00000229268 PYM1Q9BRP8 204 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms