RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CHUKO15111 745 aa10.72□□□□□ -0.69
TUBB1-201ENST00000217133 PPP1R37O75864 691 aa10.72□□□□□ -0.69
TUBB1-201ENST00000217133 CALML3P27482 149 aa10.72□□□□□ -0.69
TUBB1-201ENST00000217133 CARSP49589 748 aaKnown RBP10.72□□□□□ -0.69
TUBB1-201ENST00000217133 SEC24CP53992 1094 aa10.72□□□□□ -0.69
TUBB1-201ENST00000217133 HLTFQ14527 1009 aaKnown RBP eCLIP10.72□□□□□ -0.69
TUBB1-201ENST00000217133 GIMAP8Q8ND71 665 aaPredicted RBP10.72□□□□□ -0.69
TUBB1-201ENST00000217133 RASGRP4Q8TDF6 673 aa10.72□□□□□ -0.69
TUBB1-201ENST00000217133 ZNF473Q8WTR7 871 aaKnown RBP10.72□□□□□ -0.69
TUBB1-201ENST00000217133 GOLGA6L7A0A1B0GV03 622 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 RNASE9P60153 205 aaKnown RBP10.71□□□□□ -0.69
TUBB1-201ENST00000217133 TROAPQ12815 778 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 NPY5RQ15761 445 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 CEP85LQ5SZL2 805 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 KDM7AQ6ZMT4 941 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 SRBD1Q8N5C6 995 aaKnown RBP10.71□□□□□ -0.69
TUBB1-201ENST00000217133 MS4A14Q96JA4 679 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 CD248Q9HCU0 757 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 BAZ2BQ9UIF8 2168 aaKnown RBP10.71□□□□□ -0.69
TUBB1-201ENST00000217133 DDAH1O94760 285 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 NF2P35240 595 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 RASSF7Q02833 373 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 CCDC40Q4G0X9 1142 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 GLE1Q53GS7 698 aaKnown RBP10.71□□□□□ -0.69
TUBB1-201ENST00000217133 ANKRD40Q6AI12 368 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 NLRP14Q86W24 1093 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 CEP57Q86XR8 500 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 BLIDQ8IZY5 108 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 CCT8L2Q96SF2 557 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 DUSP9Q99956 384 aaKnown RBP10.71□□□□□ -0.69
TUBB1-201ENST00000217133 TANGO6Q9C0B7 1094 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 ARHGAP20Q9P2F6 1191 aa10.71□□□□□ -0.69
TUBB1-201ENST00000217133 KCPQ6ZWJ8 1503 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 ECM29Q5VYK3 1845 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 APBA3O96018 575 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 CDK17Q00537 523 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 PTGISQ16647 500 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 ODF2Q5BJF6 829 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 INTS5Q6P9B9 1019 aaKnown RBP10.71□□□□□ -0.7
TUBB1-201ENST00000217133 FAM196AQ6ZSG2 479 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 ARFGAP2Q8N6H7 521 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 KLC4Q9NSK0 619 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 TCP11L1Q9NUJ3 509 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 PLAGL2Q9UPG8 496 aa10.71□□□□□ -0.7
TUBB1-201ENST00000217133 CNTNAP5Q8WYK1 1306 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 DDX60Q8IY21 1712 aaKnown RBP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 ZSCAN5CA6NGD5 496 aaPredicted RBP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 SSBP05455 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 ERCC3P19447 782 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 FNTAP49354 379 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 BICDL1Q6ZP65 573 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 IQCDQ96DY2 449 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 ERGIC2Q96RQ1 377 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 BCCIPQ9P287 314 aaKnown RBP eCLIP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 CEP83Q9Y592 693 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 MYH7P12883 1935 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 A0A1W2PQJ5 194 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 MYL1P05976 194 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 GLI1P08151 1106 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 FAM153BP0C7A2 387 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 FGFR2P21802 821 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 MDH1P40925 334 aaKnown RBP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 HDLBPQ00341 1268 aaKnown RBP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 NEDD9Q14511 834 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 FAM153CQ494X1 144 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 NAALADL2Q58DX5 795 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 ATP6V1G3Q96LB4 118 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 KRT12Q99456 494 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 LUC7LQ9NQ29 371 aaKnown RBP10.7□□□□□ -0.7
TUBB1-201ENST00000217133 FAM153AQ9UHL3 310 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 ZNF233A6NK53 670 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 KLRC4O43908 158 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 FIGNQ5HY92 759 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 CCDC155Q8N6L0 562 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 MYCBPAPQ8TBZ2 947 aa10.7□□□□□ -0.7
TUBB1-201ENST00000217133 ATXN2Q99700 1313 aaKnown RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 TJP1Q07157 1748 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 HMGB1P1B2RPK0 211 aaPredicted RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 GNPATO15228 680 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 ATP2C2O75185 946 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 STK4Q13043 487 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 ZNF572Q7Z3I7 529 aaPredicted RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 IQCKQ8N0W5 287 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 TLR10Q9BXR5 811 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 SUFUQ9UMX1 484 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 LRRC53A6NM62 1247 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 KIF5BP33176 963 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 ACTN3Q08043 901 aaPredicted RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 INF2Q27J81 1249 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms