RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 SPAG7O75391 227 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 NT5C3AQ9H0P0 336 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 ARMT1Q9H993 441 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 hCG_1642624A0A1W2PR95 340 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 SERPINB2P05120 415 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 REXO1Q8N1G1 1221 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 PAGR1Q9BTK6 254 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 ATP11BQ9Y2G3 1177 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 N4BP1O75113 896 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 ANP32DO95626 131 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 EHHADHQ08426 723 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 CCDC15Q0P6D6 951 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 GEMIN8Q9NWZ8 242 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 MAPK13O15264 365 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 APOA1P02647 267 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 POLGP54098 1239 aaPredicted RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 TRIML1Q8N9V2 468 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 DDX17Q92841 729 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC12A6Q9UHW9 1150 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 GSNP06396 782 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 RANBP1P43487 201 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 HDAC4P56524 1084 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 POLR2FP61218 127 aaKnown RBP15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 RASSF7Q02833 373 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 KRT28Q7Z3Y7 464 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 WDR48Q8TAF3 677 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 TMEM191BP0C7N4 346 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 TECP42680 631 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 HSPA6P17066 643 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 ANGPT1Q15389 498 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DEPDC1Q5TB30 811 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 APOL6Q9BWW8 343 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 PLS3P13797 630 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 TRPC1P48995 793 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 IMPG1Q17R60 797 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 OR9Q1Q8NGQ5 310 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 ABI1Q8IZP0 508 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 STX19Q8N4C7 294 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 LRRC37BQ96QE4 947 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 SLFN14P0C7P3 912 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 NSUN2Q08J23 767 aaKnown RBP eCLIP15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 SGO2Q562F6 1265 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 C6orf118Q5T5N4 469 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 CRLF3Q8IUI8 442 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 ANKRD12Q6UB98 2062 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 A0A1B0GW55 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4L2P0CJ85 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4L3P0CJ86 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4L4P0CJ87 422 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4L5P0CJ88 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4L6P0CJ89 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4L7P0CJ90 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 SF3B3Q15393 1217 aaKnown RBP15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 FAM178BQ8IXR5 827 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 DUX4Q9UBX2 424 aa15.81■□□□□ 0.12
SPTLC2-201ENST00000216484 PJA2O43164 708 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 CEP78Q5JTW2 689 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 NLRP9Q7RTR0 991 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 SRRM1Q8IYB3 904 aaKnown RBP15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 SH3GL3Q99963 347 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 ZMYND10O75800 440 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 BASP1P80723 227 aaKnown RBP15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 SLMAPQ14BN4 828 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 CHRNA2Q15822 529 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 KRT25Q7Z3Z0 450 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 MYOCDQ8IZQ8 938 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 KRT75O95678 551 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 HDLBPQ00341 1268 aaKnown RBP15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC24A3Q9HC58 644 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 LZTS1Q9Y250 596 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 VPS54Q9P1Q0 977 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 LRRIQ4A6NIV6 560 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 DRP2Q13474 957 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 FSCBQ5H9T9 825 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 DARS2Q6PI48 645 aaKnown RBP15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 LZTS2Q9BRK4 669 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 SUGCTQ9HAC7 445 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 F8W8V4 182 aa15.8■□□□□ 0.12
SPTLC2-201ENST00000216484 ATP8B2P98198 1209 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 KSR2Q6VAB6 950 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 ARMCX3Q9UH62 379 aaPredicted RBP15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC8A2Q9UPR5 921 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 STK25O00506 426 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 STAT2P52630 851 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 ZBTB18Q99592 522 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 MAP3K10Q02779 954 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC27A2O14975 620 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 SLCO1A2P46721 670 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms