RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Pstpip1P97814 415 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Rhpn1Q61085 643 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tlr13Q6R5N8 991 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Plcb1Q9Z1B3 1216 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Abcb4P21440 1276 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gcnt1Q09324 428 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Serpinb6dQ3UWK8 375 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Zrsr2Q62377 462 aaKnown RBP16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 OplahQ8K010 1288 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Slc14a2Q8R4T9 930 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ubxn1Q922Y1 297 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Homer1Q9Z2Y3 366 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Chd5A2A8L1 1946 aa16.61■□□□□ 0.25
Nup54-201ENSMUST00000038514 Mx1P09922 631 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tmed8Q3UHI4 326 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ankrd13cQ3UX43 541 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Acbd5Q5XG73 508 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ccdc148Q6P5U8 527 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 PodnQ7TQ62 611 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ankrd24Q80VM7 985 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Haus4Q8BFT2 363 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 F13a1Q8BH61 732 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Drd5Q8BLD9 478 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Cd274Q9EP73 290 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Armc3A2AU72 881 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Odf2A3KGV1 830 aaKnown RBP16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 C2cd2E9Q3C1 696 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gna11P21278 359 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Alppl2P24823 529 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Skap2Q3UND0 358 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 EregQ61521 162 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ces1eQ64176 562 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Krt42Q6IFX2 452 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Arhgef19Q8BWA8 802 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 AdpgkQ8VDL4 496 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Msantd4Q91YU3 345 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ccdc43Q9CR29 222 aaKnown RBP16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Six6os1Q9CTN5 574 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Zfyve9A2A8R0 1397 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Cacna1sQ02789 1880 aa16.6■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm3893E9Q1I1 302 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Eva1cP58659 440 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Kcnma1Q08460 1209 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tax1bp1Q3UKC1 814 aaKnown RBP16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ccdc172Q810N9 267 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Xrcc4Q924T3 326 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 TbcbQ9D1E6 244 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Sh2b2Q9JID9 621 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 CenphQ9QYM8 241 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Trim30cD3YVI9 513 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ankrd35E9Q9D8 996 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Men1O88559 611 aaKnown RBP16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Nlrx1Q3TL44 975 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ttc7aQ8BGB2 858 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tmem179Q8BHH9 233 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Kbtbd4Q8R179 534 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 HibadhQ99L13 335 aaKnown RBP16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Smtnl1Q99LM3 459 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Dnajc19Q9CQV7 116 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Rwdd2aQ9D9S3 292 aa16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Fxr2Q9WVR4 673 aaKnown RBP16.59■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm7168A0AUV4 508 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm7347D3YYI9 267 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Zfpm1O35615 995 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ppp4cP97470 307 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 HmmrQ00547 794 aaKnown RBP16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Znf827Q505G8 1078 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Exoc3Q6KAR6 755 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Zfp446Q8C9M8 523 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Spata2Q8K004 515 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tbc1d23Q8K0F1 684 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Lrrc57Q9D1G5 239 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tjap1Q9DCD5 539 aa16.58■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm4985A2ALC6 410 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 Spg7Q3ULF4 781 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 Sh3gl1Q62419 368 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 Bsdc1Q80Y55 427 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 Lrrc41Q8K1C9 807 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 Kremen1Q99N43 473 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 AacsQ9D2R0 672 aa16.58■□□□□ 0.24
Nup54-201ENSMUST00000038514 Vmn2r78K7N6U5 853 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Eya3P97480 510 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Lilrb3P97484 841 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Mapk6Q61532 720 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Armcx3Q8BHS6 379 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 NkrfQ8BY02 690 aaKnown RBP16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Traf3ip3Q8C0G2 513 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Def6Q8C2K1 630 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Cdk8Q8R3L8 464 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Krt79Q8VED5 531 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Akr1b10G5E895 316 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Ap1g2O88512 791 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Stat4P42228 749 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Actn4P57780 912 aaKnown RBP16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Snip1Q8BIZ6 383 aaKnown RBP16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 AvenQ9D9K3 342 aa16.57■□□□□ 0.24
Nup54-201ENSMUST00000038514 Rsbn1lD3Z0K6 821 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 VrtnQ3SYK4 740 aa16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Prpf38aQ4FK66 312 aaKnown RBP16.56■□□□□ 0.24
Nup54-201ENSMUST00000038514 Sycp1Q62209 993 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms