RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
SCARB2-224ENST00000640880 EVX2Q03828 476 aa12.57□□□□□ -0.4
SCARB2-224ENST00000640880 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
SCARB2-224ENST00000640880 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
SCARB2-224ENST00000640880 PPP1R15BQ5SWA1 713 aa12.54□□□□□ -0.4
SCARB2-224ENST00000640880 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
SCARB2-224ENST00000640880 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
SCARB2-224ENST00000640880 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
SCARB2-224ENST00000640880 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
SCARB2-224ENST00000640880 DPYSL4O14531 572 aa12.48□□□□□ -0.41
SCARB2-224ENST00000640880 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-224ENST00000640880 TRIM66O15016 1216 aa12.47□□□□□ -0.41
SCARB2-224ENST00000640880 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
SCARB2-224ENST00000640880 PDE4DQ08499 809 aa12.46□□□□□ -0.41
SCARB2-224ENST00000640880 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
SCARB2-224ENST00000640880 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
SCARB2-224ENST00000640880 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
SCARB2-224ENST00000640880 PDIA6Q15084 440 aa12.43□□□□□ -0.42
SCARB2-224ENST00000640880 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
SCARB2-224ENST00000640880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCARB2-224ENST00000640880 DSG2Q14126 1118 aa12.4□□□□□ -0.42
SCARB2-224ENST00000640880 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
SCARB2-224ENST00000640880 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-224ENST00000640880 GPR37O15354 613 aa12.37□□□□□ -0.43
SCARB2-224ENST00000640880 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
SCARB2-224ENST00000640880 TIE1P35590 1138 aa12.35□□□□□ -0.43
SCARB2-224ENST00000640880 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
SCARB2-224ENST00000640880 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
SCARB2-224ENST00000640880 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
SCARB2-224ENST00000640880 FOXK1P85037 733 aa12.32□□□□□ -0.44
SCARB2-224ENST00000640880 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
SCARB2-224ENST00000640880 GABBR2O75899 941 aa12.31□□□□□ -0.44
SCARB2-224ENST00000640880 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
SCARB2-224ENST00000640880 MINK1Q8N4C8 1332 aaPredicted RBP12.31□□□□□ -0.44
SCARB2-224ENST00000640880 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
SCARB2-224ENST00000640880 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-224ENST00000640880 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
SCARB2-224ENST00000640880 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
SCARB2-224ENST00000640880 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
SCARB2-224ENST00000640880 BMP2KQ9NSY1 1161 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-224ENST00000640880 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
SCARB2-224ENST00000640880 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
SCARB2-224ENST00000640880 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
SCARB2-224ENST00000640880 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
SCARB2-224ENST00000640880 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
SCARB2-224ENST00000640880 IRF6O14896 467 aa12.24□□□□□ -0.45
SCARB2-224ENST00000640880 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
SCARB2-224ENST00000640880 AMHR2Q16671 573 aa12.23□□□□□ -0.45
SCARB2-224ENST00000640880 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
SCARB2-224ENST00000640880 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
SCARB2-224ENST00000640880 GNPATO15228 680 aa12.21□□□□□ -0.45
SCARB2-224ENST00000640880 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
SCARB2-224ENST00000640880 OSBPP22059 807 aa12.19□□□□□ -0.46
SCARB2-224ENST00000640880 PODXL2Q9NZ53 605 aa12.19□□□□□ -0.46
SCARB2-224ENST00000640880 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCARB2-224ENST00000640880 ARID3AQ99856 593 aa12.18□□□□□ -0.46
SCARB2-224ENST00000640880 KIF3CO14782 793 aa12.17□□□□□ -0.46
SCARB2-224ENST00000640880 FCHSD2O94868 740 aa12.17□□□□□ -0.46
SCARB2-224ENST00000640880 HIC1Q14526 733 aa12.17□□□□□ -0.46
SCARB2-224ENST00000640880 FECHP22830 423 aa12.16□□□□□ -0.46
SCARB2-224ENST00000640880 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-224ENST00000640880 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
SCARB2-224ENST00000640880 G3V3G9 751 aa12.15□□□□□ -0.46
SCARB2-224ENST00000640880 TMEM121BQ9BXQ6 578 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-224ENST00000640880 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
SCARB2-224ENST00000640880 FLIIQ13045 1269 aa12.14□□□□□ -0.47
SCARB2-224ENST00000640880 DDX12PQ92771 950 aa12.14□□□□□ -0.47
SCARB2-224ENST00000640880 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-224ENST00000640880 PTGER2P43116 358 aa12.11□□□□□ -0.47
SCARB2-224ENST00000640880 ARID3CA6NKF2 412 aa12.1□□□□□ -0.47
SCARB2-224ENST00000640880 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-224ENST00000640880 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
SCARB2-224ENST00000640880 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
SCARB2-224ENST00000640880 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
SCARB2-224ENST00000640880 APBB1O00213 710 aa12.07□□□□□ -0.48
SCARB2-224ENST00000640880 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
SCARB2-224ENST00000640880 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-224ENST00000640880 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
SCARB2-224ENST00000640880 PTGDRQ13258 359 aa12.06□□□□□ -0.48
SCARB2-224ENST00000640880 TBC1D12O60347 775 aa12.05□□□□□ -0.48
SCARB2-224ENST00000640880 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-224ENST00000640880 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-224ENST00000640880 MS4A1P11836 297 aa12.04□□□□□ -0.48
SCARB2-224ENST00000640880 CLCN6P51797 869 aa12.04□□□□□ -0.48
SCARB2-224ENST00000640880 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-224ENST00000640880 EVI5O60447 810 aa12.03□□□□□ -0.48
SCARB2-224ENST00000640880 IER5LQ5T953 404 aa12.03□□□□□ -0.48
SCARB2-224ENST00000640880 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
SCARB2-224ENST00000640880 LHX8Q68G74 356 aa12.02□□□□□ -0.49
SCARB2-224ENST00000640880 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
SCARB2-224ENST00000640880 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
SCARB2-224ENST00000640880 PLCG2P16885 1265 aa12□□□□□ -0.49
SCARB2-224ENST00000640880 REPIN1Q9BWE0 567 aaKnown RBP12□□□□□ -0.49
SCARB2-224ENST00000640880 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-224ENST00000640880 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-224ENST00000640880 CLUAP1Q96AJ1 413 aa11.98□□□□□ -0.49
SCARB2-224ENST00000640880 A6NJR5 290 aa11.97□□□□□ -0.49
SCARB2-224ENST00000640880 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
SCARB2-224ENST00000640880 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-224ENST00000640880 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms