RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 RRP9O43818 475 aaKnown RBP8.16□□□□□ -1.1
NECAP1-222ENST00000640072 FOXD1Q16676 465 aa8.15□□□□□ -1.1
NECAP1-222ENST00000640072 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
NECAP1-222ENST00000640072 ZNF622Q969S3 477 aaKnown RBP eCLIP8.13□□□□□ -1.11
NECAP1-222ENST00000640072 C11orf95C9JLR9 678 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-222ENST00000640072 AEBP1Q8IUX7 1158 aa8.13□□□□□ -1.11
NECAP1-222ENST00000640072 HDAC5Q9UQL6 1122 aa8.13□□□□□ -1.11
NECAP1-222ENST00000640072 PAK3O75914 559 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-222ENST00000640072 RGS3P49796 1198 aa8.12□□□□□ -1.11
NECAP1-222ENST00000640072 PLEKHD1A6NEE1 506 aa8.12□□□□□ -1.11
NECAP1-222ENST00000640072 PHF14O94880 888 aa8.12□□□□□ -1.11
NECAP1-222ENST00000640072 PIAS4Q8N2W9 510 aaPredicted RBP8.1□□□□□ -1.11
NECAP1-222ENST00000640072 IRX3P78415 501 aaPredicted RBP8.1□□□□□ -1.11
NECAP1-222ENST00000640072 FAM43AQ8N2R8 423 aa8.09□□□□□ -1.11
NECAP1-222ENST00000640072 RGS22Q8NE09 1264 aa8.09□□□□□ -1.11
NECAP1-222ENST00000640072 MAFGO15525 162 aa8.09□□□□□ -1.11
NECAP1-222ENST00000640072 MAPK8IP2Q13387 824 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-222ENST00000640072 ZCCHC6Q5VYS8 1495 aaKnown RBP8.08□□□□□ -1.12
NECAP1-222ENST00000640072 FOXD4L6Q3SYB3 417 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-222ENST00000640072 FOXD4L3Q6VB84 417 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-222ENST00000640072 ZNF830Q96NB3 372 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-222ENST00000640072 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
NECAP1-222ENST00000640072 MYCNP04198 464 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-222ENST00000640072 HSP90AB4PQ58FF6 505 aa8.05□□□□□ -1.12
NECAP1-222ENST00000640072 TMTC2Q8N394 836 aa8.05□□□□□ -1.12
NECAP1-222ENST00000640072 PNNQ9H307 717 aaKnown RBP8.05□□□□□ -1.12
NECAP1-222ENST00000640072 IPO9Q96P70 1041 aaKnown RBP8.05□□□□□ -1.12
NECAP1-222ENST00000640072 CALD1Q05682 793 aaKnown RBP8.04□□□□□ -1.12
NECAP1-222ENST00000640072 GSE1Q14687 1217 aa8.04□□□□□ -1.12
NECAP1-222ENST00000640072 ANP32BQ92688 251 aaKnown RBP8.04□□□□□ -1.12
NECAP1-222ENST00000640072 VGLL3A8MV65 326 aa8.04□□□□□ -1.12
NECAP1-222ENST00000640072 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-222ENST00000640072 APBB1O00213 710 aa8.04□□□□□ -1.12
NECAP1-222ENST00000640072 AXDND1Q5T1B0 1012 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-222ENST00000640072 CDCA8Q53HL2 280 aa8.03□□□□□ -1.12
NECAP1-222ENST00000640072 TMCO4Q5TGY1 634 aa8.02□□□□□ -1.12
NECAP1-222ENST00000640072 E9PSI1 815 aa8.02□□□□□ -1.13
NECAP1-222ENST00000640072 NPM3O75607 178 aaKnown RBP8.02□□□□□ -1.13
NECAP1-222ENST00000640072 CC2D1BQ5T0F9 858 aaKnown RBP8.02□□□□□ -1.13
NECAP1-222ENST00000640072 WASHC2CQ9Y4E1 1318 aa8.01□□□□□ -1.13
NECAP1-222ENST00000640072 ADRA2BP18089 450 aa8.01□□□□□ -1.13
NECAP1-222ENST00000640072 PRDM4Q9UKN5 801 aa8.01□□□□□ -1.13
NECAP1-222ENST00000640072 WASHC2AQ641Q2 1341 aa8□□□□□ -1.13
NECAP1-222ENST00000640072 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
NECAP1-222ENST00000640072 NOL8Q76FK4 1167 aaKnown RBP8□□□□□ -1.13
NECAP1-222ENST00000640072 EXOC8Q8IYI6 725 aa8□□□□□ -1.13
NECAP1-222ENST00000640072 TNNT2P45379 298 aaPredicted RBP7.99□□□□□ -1.13
NECAP1-222ENST00000640072 NEUROD2Q15784 382 aa7.99□□□□□ -1.13
NECAP1-222ENST00000640072 LOC102724159A0A0B4J2E5 919 aa7.97□□□□□ -1.13
NECAP1-222ENST00000640072 PWP2Q15269 919 aaKnown RBP7.97□□□□□ -1.13
NECAP1-222ENST00000640072 MPNDQ8N594 471 aa7.97□□□□□ -1.13
NECAP1-222ENST00000640072 TRIM52Q96A61 297 aa7.97□□□□□ -1.13
NECAP1-222ENST00000640072 BRD1O95696 1058 aa7.97□□□□□ -1.13
NECAP1-222ENST00000640072 SLC52A1Q9NWF4 448 aa7.95□□□□□ -1.14
NECAP1-222ENST00000640072 SGSM3Q96HU1 749 aa7.95□□□□□ -1.14
NECAP1-222ENST00000640072 PDCL3Q9H2J4 239 aa7.95□□□□□ -1.14
NECAP1-222ENST00000640072 DNTTIP2Q5QJE6 756 aaKnown RBP7.94□□□□□ -1.14
NECAP1-222ENST00000640072 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
NECAP1-222ENST00000640072 PPP4R2Q9NY27 417 aa7.94□□□□□ -1.14
NECAP1-222ENST00000640072 MMP14P50281 582 aa7.94□□□□□ -1.14
NECAP1-222ENST00000640072 VGFO15240 615 aaPredicted RBP7.94□□□□□ -1.14
NECAP1-222ENST00000640072 ARMCX6Q7L4S7 300 aa7.93□□□□□ -1.14
NECAP1-222ENST00000640072 FRAT1Q92837 279 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-222ENST00000640072 SMARCA5O60264 1052 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-222ENST00000640072 SPTY2D1Q68D10 685 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-222ENST00000640072 TMEM51Q9NW97 253 aa7.93□□□□□ -1.14
NECAP1-222ENST00000640072 ZHX1Q9UKY1 873 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-222ENST00000640072 SH3BP1Q9Y3L3 701 aa7.92□□□□□ -1.14
NECAP1-222ENST00000640072 TTC36A6NLP5 189 aa7.91□□□□□ -1.14
NECAP1-222ENST00000640072 CASC1Q6TDU7 716 aa7.91□□□□□ -1.14
NECAP1-222ENST00000640072 RIPOR2Q9Y4F9 1068 aa7.91□□□□□ -1.14
NECAP1-222ENST00000640072 POLD1P28340 1107 aa7.91□□□□□ -1.14
NECAP1-222ENST00000640072 KCNH8Q96L42 1107 aa7.91□□□□□ -1.14
NECAP1-222ENST00000640072 ARID4AP29374 1257 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-222ENST00000640072 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
NECAP1-222ENST00000640072 SEMA3FQ13275 785 aa7.9□□□□□ -1.15
NECAP1-222ENST00000640072 RBM26Q5T8P6 1007 aaKnown RBP7.89□□□□□ -1.15
NECAP1-222ENST00000640072 NBPF1Q3BBV0 1214 aa7.89□□□□□ -1.15
NECAP1-222ENST00000640072 RINLQ6ZS11 566 aa7.89□□□□□ -1.15
NECAP1-222ENST00000640072 P3H3Q8IVL6 736 aa7.89□□□□□ -1.15
NECAP1-222ENST00000640072 TRIM44Q96DX7 344 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-222ENST00000640072 MYH16Q9H6N6 1097 aa7.88□□□□□ -1.15
NECAP1-222ENST00000640072 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
NECAP1-222ENST00000640072 ZBTB12Q9Y330 459 aaPredicted RBP7.88□□□□□ -1.15
NECAP1-222ENST00000640072 SPINK5Q9NQ38 1064 aaPredicted RBP7.87□□□□□ -1.15
NECAP1-222ENST00000640072 RRAGDQ9NQL2 400 aaPredicted RBP7.87□□□□□ -1.15
NECAP1-222ENST00000640072 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
NECAP1-222ENST00000640072 EGFL6Q8IUX8 553 aa7.87□□□□□ -1.15
NECAP1-222ENST00000640072 NACADO15069 1562 aa7.87□□□□□ -1.15
NECAP1-222ENST00000640072 RGL3Q3MIN7 710 aa7.86□□□□□ -1.15
NECAP1-222ENST00000640072 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
NECAP1-222ENST00000640072 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
NECAP1-222ENST00000640072 TPM2P07951 284 aa7.86□□□□□ -1.15
NECAP1-222ENST00000640072 APBB1IPQ7Z5R6 666 aaPredicted RBP7.86□□□□□ -1.15
NECAP1-222ENST00000640072 CCDC125Q86Z20 511 aa7.86□□□□□ -1.15
NECAP1-222ENST00000640072 PSEN1P49768 467 aa7.85□□□□□ -1.15
NECAP1-222ENST00000640072 L1TD1Q5T7N2 865 aaKnown RBP7.85□□□□□ -1.15
NECAP1-222ENST00000640072 KAT6BQ8WYB5 2073 aa7.85□□□□□ -1.15
NECAP1-222ENST00000640072 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
NECAP1-222ENST00000640072 CENPJQ9HC77 1338 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms