RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
TARDBP-229ENST00000638264 FAM69CQ0P6D2 419 aa17.76■□□□□ 0.43
TARDBP-229ENST00000638264 EFCAB2Q5VUJ9 269 aa17.76■□□□□ 0.43
TARDBP-229ENST00000638264 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
TARDBP-229ENST00000638264 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
TARDBP-229ENST00000638264 PLEKHH2Q8IVE3 1493 aa17.74■□□□□ 0.43
TARDBP-229ENST00000638264 ARHGAP5Q13017 1502 aa17.72■□□□□ 0.43
TARDBP-229ENST00000638264 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
TARDBP-229ENST00000638264 PTPN23Q9H3S7 1636 aa17.72■□□□□ 0.43
TARDBP-229ENST00000638264 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
TARDBP-229ENST00000638264 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
TARDBP-229ENST00000638264 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
TARDBP-229ENST00000638264 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
TARDBP-229ENST00000638264 FANCAO15360 1455 aa17.69■□□□□ 0.42
TARDBP-229ENST00000638264 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
TARDBP-229ENST00000638264 NEO1Q92859 1461 aa17.69■□□□□ 0.42
TARDBP-229ENST00000638264 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
TARDBP-229ENST00000638264 CAMSAP2Q08AD1 1489 aa17.68■□□□□ 0.42
TARDBP-229ENST00000638264 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
TARDBP-229ENST00000638264 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
TARDBP-229ENST00000638264 AKNAQ7Z591 1439 aa17.64■□□□□ 0.41
TARDBP-229ENST00000638264 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
TARDBP-229ENST00000638264 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
TARDBP-229ENST00000638264 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
TARDBP-229ENST00000638264 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
TARDBP-229ENST00000638264 ABCC1P33527 1531 aa17.61■□□□□ 0.41
TARDBP-229ENST00000638264 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
TARDBP-229ENST00000638264 DAPK1P53355 1430 aa17.59■□□□□ 0.41
TARDBP-229ENST00000638264 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.41
TARDBP-229ENST00000638264 CCDC141Q6ZP82 1450 aa17.58■□□□□ 0.41
TARDBP-229ENST00000638264 TSPY4P0CV99 314 aa17.58■□□□□ 0.4
TARDBP-229ENST00000638264 TSPY10P0CW01 314 aa17.58■□□□□ 0.4
TARDBP-229ENST00000638264 SHANK2Q9UPX8 1470 aa17.57■□□□□ 0.4
TARDBP-229ENST00000638264 ABCC5O15440 1437 aa17.57■□□□□ 0.4
TARDBP-229ENST00000638264 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
TARDBP-229ENST00000638264 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■□□□ 12.6
TARDBP-229ENST00000638264 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
TARDBP-229ENST00000638264 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
TARDBP-229ENST00000638264 PPRC1Q5VV67 1664 aaKnown RBP17.55■□□□□ 0.4
TARDBP-229ENST00000638264 ROCK1Q13464 1354 aa17.54■□□□□ 0.4
TARDBP-229ENST00000638264 ARHGEF12Q9NZN5 1544 aa17.54■□□□□ 0.4
TARDBP-229ENST00000638264 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
TARDBP-229ENST00000638264 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
TARDBP-229ENST00000638264 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
TARDBP-229ENST00000638264 ITGAEP38570 1179 aa17.52■□□□□ 0.4
TARDBP-229ENST00000638264 POGZQ7Z3K3 1410 aa17.52■□□□□ 0.4
TARDBP-229ENST00000638264 TSPOAP1O95153 1857 aa17.51■□□□□ 0.39
TARDBP-229ENST00000638264 MAST1Q9Y2H9 1570 aa17.51■□□□□ 0.39
TARDBP-229ENST00000638264 TRAPPC8Q9Y2L5 1435 aa17.51■□□□□ 0.39
TARDBP-229ENST00000638264 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
TARDBP-229ENST00000638264 ADGRL2O95490 1459 aa17.5■□□□□ 0.39
TARDBP-229ENST00000638264 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
TARDBP-229ENST00000638264 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
TARDBP-229ENST00000638264 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
TARDBP-229ENST00000638264 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
TARDBP-229ENST00000638264 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
TARDBP-229ENST00000638264 AFAP1Q8N556 730 aa17.48■□□□□ 0.39
TARDBP-229ENST00000638264 KDM5CP41229 1560 aa17.48■□□□□ 0.39
TARDBP-229ENST00000638264 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
TARDBP-229ENST00000638264 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
TARDBP-229ENST00000638264 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
TARDBP-229ENST00000638264 HRCP23327 699 aa17.46■□□□□ 0.39
TARDBP-229ENST00000638264 MAGI2Q86UL8 1455 aa17.45■□□□□ 0.38
TARDBP-229ENST00000638264 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
TARDBP-229ENST00000638264 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
TARDBP-229ENST00000638264 ZMYM4Q5VZL5 1548 aa17.43■□□□□ 0.38
TARDBP-229ENST00000638264 PLXNC1O60486 1568 aa17.43■□□□□ 0.38
TARDBP-229ENST00000638264 RICTORQ6R327 1708 aa17.43■□□□□ 0.38
TARDBP-229ENST00000638264 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
TARDBP-229ENST00000638264 RAPGEF3O95398 923 aa17.42■□□□□ 0.38
TARDBP-229ENST00000638264 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
TARDBP-229ENST00000638264 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
TARDBP-229ENST00000638264 NAIPQ13075 1403 aa17.41■□□□□ 0.38
TARDBP-229ENST00000638264 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
TARDBP-229ENST00000638264 HECW2Q9P2P5 1572 aa17.4■□□□□ 0.38
TARDBP-229ENST00000638264 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
TARDBP-229ENST00000638264 RRP7BPQ9NSQ0 103 aa17.39■□□□□ 0.37
TARDBP-229ENST00000638264 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
TARDBP-229ENST00000638264 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
TARDBP-229ENST00000638264 COL17A1Q9UMD9 1497 aaPredicted RBP17.37■□□□□ 0.37
TARDBP-229ENST00000638264 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
TARDBP-229ENST00000638264 GCC2Q8IWJ2 1684 aa17.37■□□□□ 0.37
TARDBP-229ENST00000638264 KIDINS220Q9ULH0 1771 aa17.36■□□□□ 0.37
TARDBP-229ENST00000638264 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
TARDBP-229ENST00000638264 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
TARDBP-229ENST00000638264 KDM6BO15054 1643 aa17.36■□□□□ 0.37
TARDBP-229ENST00000638264 DHX29Q7Z478 1369 aaKnown RBP17.34■□□□□ 0.37
TARDBP-229ENST00000638264 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
TARDBP-229ENST00000638264 A2MP01023 1474 aa17.31■□□□□ 0.36
TARDBP-229ENST00000638264 ATP10AO60312 1499 aa17.31■□□□□ 0.36
TARDBP-229ENST00000638264 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
TARDBP-229ENST00000638264 DIP2CQ9Y2E4 1556 aa17.29■□□□□ 0.36
TARDBP-229ENST00000638264 YEATS2Q9ULM3 1422 aa17.28■□□□□ 0.36
TARDBP-229ENST00000638264 ABCA6Q8N139 1617 aa17.28■□□□□ 0.36
TARDBP-229ENST00000638264 EIF2AK4Q9P2K8 1649 aaKnown RBP17.28■□□□□ 0.36
TARDBP-229ENST00000638264 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
TARDBP-229ENST00000638264 AGLP35573 1532 aa17.25■□□□□ 0.35
TARDBP-229ENST00000638264 BCORL1Q5H9F3 1711 aa17.24■□□□□ 0.35
TARDBP-229ENST00000638264 KIF3BO15066 747 aa17.22■□□□□ 0.35
TARDBP-229ENST00000638264 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms