RNA–Protein interactions for RNA: ENST00000635530.1

SMARCA2-242, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-242ENST00000635530 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.01
SMARCA2-242ENST00000635530 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
SMARCA2-242ENST00000635530 CAMK2BQ13554 666 aa14.95□□□□□ -0.02
SMARCA2-242ENST00000635530 PLCG2P16885 1265 aa14.94□□□□□ -0.02
SMARCA2-242ENST00000635530 COLQQ9Y215 455 aaPredicted RBP14.94□□□□□ -0.02
SMARCA2-242ENST00000635530 BOLA1Q9Y3E2 137 aa14.94□□□□□ -0.02
SMARCA2-242ENST00000635530 POTEFA5A3E0 1075 aa14.93□□□□□ -0.02
SMARCA2-242ENST00000635530 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
SMARCA2-242ENST00000635530 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
SMARCA2-242ENST00000635530 ARIH1Q9Y4X5 557 aaPredicted RBP14.9□□□□□ -0.02
SMARCA2-242ENST00000635530 KIF3CO14782 793 aa14.86□□□□□ -0.03
SMARCA2-242ENST00000635530 DSG2Q14126 1118 aa14.86□□□□□ -0.03
SMARCA2-242ENST00000635530 SEC24BO95487 1268 aa14.84□□□□□ -0.03
SMARCA2-242ENST00000635530 C7P10643 843 aa14.84□□□□□ -0.03
SMARCA2-242ENST00000635530 FOXK1P85037 733 aa14.84□□□□□ -0.03
SMARCA2-242ENST00000635530 L3MBTL3Q96JM7 780 aaPredicted RBP14.84□□□□□ -0.03
SMARCA2-242ENST00000635530 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
SMARCA2-242ENST00000635530 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
SMARCA2-242ENST00000635530 C2orf72A6NCS6 295 aa14.81□□□□□ -0.04
SMARCA2-242ENST00000635530 TMC2Q8TDI7 906 aa14.81□□□□□ -0.04
SMARCA2-242ENST00000635530 SEMA3EO15041 775 aa14.8□□□□□ -0.04
SMARCA2-242ENST00000635530 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
SMARCA2-242ENST00000635530 TESPA1A2RU30 521 aaPredicted RBP14.79□□□□□ -0.04
SMARCA2-242ENST00000635530 G3V3G9 751 aa14.79□□□□□ -0.04
SMARCA2-242ENST00000635530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCA2-242ENST00000635530 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
SMARCA2-242ENST00000635530 PLPP6Q8IY26 295 aa14.74□□□□□ -0.05
SMARCA2-242ENST00000635530 DPYSL4O14531 572 aa14.69□□□□□ -0.06
SMARCA2-242ENST00000635530 PDIA6Q15084 440 aa14.67□□□□□ -0.06
SMARCA2-242ENST00000635530 TULP1O00294 542 aaPredicted RBP14.62□□□□□ -0.07
SMARCA2-242ENST00000635530 MLLT3P42568 568 aaPredicted RBP14.62□□□□□ -0.07
SMARCA2-242ENST00000635530 C3orf67Q6ZVT6 689 aa14.62□□□□□ -0.07
SMARCA2-242ENST00000635530 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
SMARCA2-242ENST00000635530 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
SMARCA2-242ENST00000635530 SMYD5Q6GMV2 418 aa14.56□□□□□ -0.08
SMARCA2-242ENST00000635530 ZC3H15Q8WU90 426 aaKnown RBP14.56□□□□□ -0.08
SMARCA2-242ENST00000635530 UPF1Q92900 1129 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMARCA2-242ENST00000635530 POTEJP0CG39 1038 aa14.53□□□□□ -0.08
SMARCA2-242ENST00000635530 MAP3K9P80192 1104 aa14.51□□□□□ -0.09
SMARCA2-242ENST00000635530 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
SMARCA2-242ENST00000635530 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
SMARCA2-242ENST00000635530 POTEB2H3BUK9 544 aa14.49□□□□□ -0.09
SMARCA2-242ENST00000635530 PTCD2Q8WV60 388 aaKnown RBP14.49□□□□□ -0.09
SMARCA2-242ENST00000635530 SLC34A2O95436 690 aa14.48□□□□□ -0.09
SMARCA2-242ENST00000635530 ZMYND10O75800 440 aa14.43□□□□□ -0.1
SMARCA2-242ENST00000635530 PTGER2P43116 358 aa14.43□□□□□ -0.1
SMARCA2-242ENST00000635530 EVI5O60447 810 aa14.41□□□□□ -0.1
SMARCA2-242ENST00000635530 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
SMARCA2-242ENST00000635530 TBC1D12O60347 775 aa14.39□□□□□ -0.11
SMARCA2-242ENST00000635530 GRXCR2A6NFK2 248 aa14.38□□□□□ -0.11
SMARCA2-242ENST00000635530 GPR37O15354 613 aa14.38□□□□□ -0.11
SMARCA2-242ENST00000635530 OSBPP22059 807 aa14.37□□□□□ -0.11
SMARCA2-242ENST00000635530 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
SMARCA2-242ENST00000635530 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
SMARCA2-242ENST00000635530 SLC24A3Q9HC58 644 aa14.35□□□□□ -0.11
SMARCA2-242ENST00000635530 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-242ENST00000635530 DDX12PQ92771 950 aa14.34□□□□□ -0.11
SMARCA2-242ENST00000635530 PCDHGA4Q9Y5G9 962 aa14.34□□□□□ -0.11
SMARCA2-242ENST00000635530 KDM4FA0A1W2PPD8 638 aa14.33□□□□□ -0.12
SMARCA2-242ENST00000635530 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
SMARCA2-242ENST00000635530 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-242ENST00000635530 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
SMARCA2-242ENST00000635530 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
SMARCA2-242ENST00000635530 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
SMARCA2-242ENST00000635530 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
SMARCA2-242ENST00000635530 PHF14O94880 888 aa14.23□□□□□ -0.13
SMARCA2-242ENST00000635530 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
SMARCA2-242ENST00000635530 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
SMARCA2-242ENST00000635530 PCDHGA10Q9Y5H3 936 aa14.21□□□□□ -0.13
SMARCA2-242ENST00000635530 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
SMARCA2-242ENST00000635530 GPR153Q6NV75 609 aa14.19□□□□□ -0.14
SMARCA2-242ENST00000635530 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.14
SMARCA2-242ENST00000635530 EPAS1Q99814 870 aa14.19□□□□□ -0.14
SMARCA2-242ENST00000635530 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
SMARCA2-242ENST00000635530 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
SMARCA2-242ENST00000635530 PTGDRQ13258 359 aa14.17□□□□□ -0.14
SMARCA2-242ENST00000635530 AK7Q96M32 723 aa14.17□□□□□ -0.14
SMARCA2-242ENST00000635530 CDHR5Q9HBB8 845 aa14.17□□□□□ -0.14
SMARCA2-242ENST00000635530 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
SMARCA2-242ENST00000635530 FCHSD2O94868 740 aa14.15□□□□□ -0.14
SMARCA2-242ENST00000635530 NUDT7P0C024 238 aa14.15□□□□□ -0.14
SMARCA2-242ENST00000635530 GNPATO15228 680 aa14.14□□□□□ -0.15
SMARCA2-242ENST00000635530 FOSBP53539 338 aa14.14□□□□□ -0.15
SMARCA2-242ENST00000635530 HIC1Q14526 733 aa14.14□□□□□ -0.15
SMARCA2-242ENST00000635530 FECHP22830 423 aa14.13□□□□□ -0.15
SMARCA2-242ENST00000635530 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
SMARCA2-242ENST00000635530 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
SMARCA2-242ENST00000635530 NPDC1Q9NQX5 325 aaPredicted RBP14.13□□□□□ -0.15
SMARCA2-242ENST00000635530 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
SMARCA2-242ENST00000635530 RIMBP2O15034 1052 aa14.11□□□□□ -0.15
SMARCA2-242ENST00000635530 NEUROD2Q15784 382 aa14.11□□□□□ -0.15
SMARCA2-242ENST00000635530 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
SMARCA2-242ENST00000635530 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
SMARCA2-242ENST00000635530 TRIM66O15016 1216 aa14.1□□□□□ -0.15
SMARCA2-242ENST00000635530 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
SMARCA2-242ENST00000635530 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
SMARCA2-242ENST00000635530 MAP3K7O43318 606 aa14.09□□□□□ -0.15
SMARCA2-242ENST00000635530 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
SMARCA2-242ENST00000635530 LHX8Q68G74 356 aa14.08□□□□□ -0.16
SMARCA2-242ENST00000635530 CCDC102AQ96A19 550 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms