RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.01
SMARCA2-239ENST00000635388 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
SMARCA2-239ENST00000635388 CAMK2BQ13554 666 aa14.95□□□□□ -0.02
SMARCA2-239ENST00000635388 PLCG2P16885 1265 aa14.94□□□□□ -0.02
SMARCA2-239ENST00000635388 COLQQ9Y215 455 aaPredicted RBP14.94□□□□□ -0.02
SMARCA2-239ENST00000635388 BOLA1Q9Y3E2 137 aa14.94□□□□□ -0.02
SMARCA2-239ENST00000635388 POTEFA5A3E0 1075 aa14.93□□□□□ -0.02
SMARCA2-239ENST00000635388 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
SMARCA2-239ENST00000635388 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
SMARCA2-239ENST00000635388 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
SMARCA2-239ENST00000635388 ARIH1Q9Y4X5 557 aaPredicted RBP14.9□□□□□ -0.02
SMARCA2-239ENST00000635388 KIF3CO14782 793 aa14.86□□□□□ -0.03
SMARCA2-239ENST00000635388 DSG2Q14126 1118 aa14.86□□□□□ -0.03
SMARCA2-239ENST00000635388 SEC24BO95487 1268 aa14.84□□□□□ -0.03
SMARCA2-239ENST00000635388 C7P10643 843 aa14.84□□□□□ -0.03
SMARCA2-239ENST00000635388 FOXK1P85037 733 aa14.84□□□□□ -0.03
SMARCA2-239ENST00000635388 L3MBTL3Q96JM7 780 aaPredicted RBP14.84□□□□□ -0.03
SMARCA2-239ENST00000635388 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
SMARCA2-239ENST00000635388 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
SMARCA2-239ENST00000635388 C2orf72A6NCS6 295 aa14.81□□□□□ -0.04
SMARCA2-239ENST00000635388 TMC2Q8TDI7 906 aa14.81□□□□□ -0.04
SMARCA2-239ENST00000635388 SEMA3EO15041 775 aa14.8□□□□□ -0.04
SMARCA2-239ENST00000635388 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
SMARCA2-239ENST00000635388 TESPA1A2RU30 521 aaPredicted RBP14.79□□□□□ -0.04
SMARCA2-239ENST00000635388 G3V3G9 751 aa14.79□□□□□ -0.04
SMARCA2-239ENST00000635388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCA2-239ENST00000635388 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
SMARCA2-239ENST00000635388 PLPP6Q8IY26 295 aa14.74□□□□□ -0.05
SMARCA2-239ENST00000635388 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
SMARCA2-239ENST00000635388 DPYSL4O14531 572 aa14.69□□□□□ -0.06
SMARCA2-239ENST00000635388 PDIA6Q15084 440 aa14.67□□□□□ -0.06
SMARCA2-239ENST00000635388 TULP1O00294 542 aaPredicted RBP14.62□□□□□ -0.07
SMARCA2-239ENST00000635388 MLLT3P42568 568 aaPredicted RBP14.62□□□□□ -0.07
SMARCA2-239ENST00000635388 C3orf67Q6ZVT6 689 aa14.62□□□□□ -0.07
SMARCA2-239ENST00000635388 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
SMARCA2-239ENST00000635388 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
SMARCA2-239ENST00000635388 SMYD5Q6GMV2 418 aa14.56□□□□□ -0.08
SMARCA2-239ENST00000635388 ZC3H15Q8WU90 426 aaKnown RBP14.56□□□□□ -0.08
SMARCA2-239ENST00000635388 UPF1Q92900 1129 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMARCA2-239ENST00000635388 POTEJP0CG39 1038 aa14.53□□□□□ -0.08
SMARCA2-239ENST00000635388 MAP3K9P80192 1104 aa14.51□□□□□ -0.09
SMARCA2-239ENST00000635388 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
SMARCA2-239ENST00000635388 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
SMARCA2-239ENST00000635388 POTEB2H3BUK9 544 aa14.49□□□□□ -0.09
SMARCA2-239ENST00000635388 PTCD2Q8WV60 388 aaKnown RBP14.49□□□□□ -0.09
SMARCA2-239ENST00000635388 SLC34A2O95436 690 aa14.48□□□□□ -0.09
SMARCA2-239ENST00000635388 ABCC9O60706 1549 aa14.43□□□□□ -0.1
SMARCA2-239ENST00000635388 ZMYND10O75800 440 aa14.43□□□□□ -0.1
SMARCA2-239ENST00000635388 PTGER2P43116 358 aa14.43□□□□□ -0.1
SMARCA2-239ENST00000635388 EVI5O60447 810 aa14.41□□□□□ -0.1
SMARCA2-239ENST00000635388 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
SMARCA2-239ENST00000635388 TBC1D12O60347 775 aa14.39□□□□□ -0.11
SMARCA2-239ENST00000635388 GRXCR2A6NFK2 248 aa14.38□□□□□ -0.11
SMARCA2-239ENST00000635388 GPR37O15354 613 aa14.38□□□□□ -0.11
SMARCA2-239ENST00000635388 OSBPP22059 807 aa14.37□□□□□ -0.11
SMARCA2-239ENST00000635388 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
SMARCA2-239ENST00000635388 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
SMARCA2-239ENST00000635388 SLC24A3Q9HC58 644 aa14.35□□□□□ -0.11
SMARCA2-239ENST00000635388 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-239ENST00000635388 DDX12PQ92771 950 aa14.34□□□□□ -0.11
SMARCA2-239ENST00000635388 PCDHGA4Q9Y5G9 962 aa14.34□□□□□ -0.11
SMARCA2-239ENST00000635388 KDM4FA0A1W2PPD8 638 aa14.33□□□□□ -0.12
SMARCA2-239ENST00000635388 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
SMARCA2-239ENST00000635388 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-239ENST00000635388 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
SMARCA2-239ENST00000635388 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
SMARCA2-239ENST00000635388 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
SMARCA2-239ENST00000635388 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
SMARCA2-239ENST00000635388 PHF14O94880 888 aa14.23□□□□□ -0.13
SMARCA2-239ENST00000635388 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
SMARCA2-239ENST00000635388 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
SMARCA2-239ENST00000635388 PCDHGA10Q9Y5H3 936 aa14.21□□□□□ -0.13
SMARCA2-239ENST00000635388 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
SMARCA2-239ENST00000635388 GPR153Q6NV75 609 aa14.19□□□□□ -0.14
SMARCA2-239ENST00000635388 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.14
SMARCA2-239ENST00000635388 EPAS1Q99814 870 aa14.19□□□□□ -0.14
SMARCA2-239ENST00000635388 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
SMARCA2-239ENST00000635388 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
SMARCA2-239ENST00000635388 PTGDRQ13258 359 aa14.17□□□□□ -0.14
SMARCA2-239ENST00000635388 AK7Q96M32 723 aa14.17□□□□□ -0.14
SMARCA2-239ENST00000635388 CDHR5Q9HBB8 845 aa14.17□□□□□ -0.14
SMARCA2-239ENST00000635388 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
SMARCA2-239ENST00000635388 FCHSD2O94868 740 aa14.15□□□□□ -0.14
SMARCA2-239ENST00000635388 NUDT7P0C024 238 aa14.15□□□□□ -0.14
SMARCA2-239ENST00000635388 GNPATO15228 680 aa14.14□□□□□ -0.15
SMARCA2-239ENST00000635388 FOSBP53539 338 aa14.14□□□□□ -0.15
SMARCA2-239ENST00000635388 HIC1Q14526 733 aa14.14□□□□□ -0.15
SMARCA2-239ENST00000635388 FECHP22830 423 aa14.13□□□□□ -0.15
SMARCA2-239ENST00000635388 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
SMARCA2-239ENST00000635388 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
SMARCA2-239ENST00000635388 NPDC1Q9NQX5 325 aaPredicted RBP14.13□□□□□ -0.15
SMARCA2-239ENST00000635388 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
SMARCA2-239ENST00000635388 RIMBP2O15034 1052 aa14.11□□□□□ -0.15
SMARCA2-239ENST00000635388 NEUROD2Q15784 382 aa14.11□□□□□ -0.15
SMARCA2-239ENST00000635388 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
SMARCA2-239ENST00000635388 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
SMARCA2-239ENST00000635388 TRIM66O15016 1216 aa14.1□□□□□ -0.15
SMARCA2-239ENST00000635388 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
SMARCA2-239ENST00000635388 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
SMARCA2-239ENST00000635388 MAP3K7O43318 606 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms