RNA–Protein interactions for RNA: ENST00000634989.1

SMARCA2-232, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-232ENST00000634989 PDE4AP27815 886 aa11.7□□□□□ -0.54
SMARCA2-232ENST00000634989 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-232ENST00000634989 MFSD10Q14728 455 aa11.69□□□□□ -0.54
SMARCA2-232ENST00000634989 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
SMARCA2-232ENST00000634989 MS4A4AQ96JQ5 239 aa11.68□□□□□ -0.54
SMARCA2-232ENST00000634989 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-232ENST00000634989 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
SMARCA2-232ENST00000634989 IER5LQ5T953 404 aa11.66□□□□□ -0.54
SMARCA2-232ENST00000634989 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
SMARCA2-232ENST00000634989 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
SMARCA2-232ENST00000634989 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
SMARCA2-232ENST00000634989 ARIH1Q9Y4X5 557 aaPredicted RBP11.66□□□□□ -0.54
SMARCA2-232ENST00000634989 SEMA3EO15041 775 aa11.65□□□□□ -0.54
SMARCA2-232ENST00000634989 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-232ENST00000634989 ZC3H15Q8WU90 426 aaKnown RBP11.65□□□□□ -0.54
SMARCA2-232ENST00000634989 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
SMARCA2-232ENST00000634989 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
SMARCA2-232ENST00000634989 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
SMARCA2-232ENST00000634989 SEC24BO95487 1268 aa11.62□□□□□ -0.55
SMARCA2-232ENST00000634989 SMYD5Q6GMV2 418 aa11.62□□□□□ -0.55
SMARCA2-232ENST00000634989 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
SMARCA2-232ENST00000634989 OCEL1Q9H607 264 aa11.6□□□□□ -0.55
SMARCA2-232ENST00000634989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.552e-8■■■■□ 21
SMARCA2-232ENST00000634989 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
SMARCA2-232ENST00000634989 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
SMARCA2-232ENST00000634989 PLCG2P16885 1265 aa11.57□□□□□ -0.56
SMARCA2-232ENST00000634989 ZMYND10O75800 440 aa11.52□□□□□ -0.57
SMARCA2-232ENST00000634989 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
SMARCA2-232ENST00000634989 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
SMARCA2-232ENST00000634989 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
SMARCA2-232ENST00000634989 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
SMARCA2-232ENST00000634989 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
SMARCA2-232ENST00000634989 SPDYE16A6NNV3 312 aaPredicted RBP11.4□□□□□ -0.58
SMARCA2-232ENST00000634989 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
SMARCA2-232ENST00000634989 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
SMARCA2-232ENST00000634989 GPIHBP1Q8IV16 184 aa11.4□□□□□ -0.58
SMARCA2-232ENST00000634989 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
SMARCA2-232ENST00000634989 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
SMARCA2-232ENST00000634989 MLLT3P42568 568 aaPredicted RBP11.39□□□□□ -0.59
SMARCA2-232ENST00000634989 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
SMARCA2-232ENST00000634989 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
SMARCA2-232ENST00000634989 PDIA6Q15084 440 aa11.38□□□□□ -0.59
SMARCA2-232ENST00000634989 RBM26Q5T8P6 1007 aaKnown RBP11.38□□□□□ -0.59
SMARCA2-232ENST00000634989 AK7Q96M32 723 aa11.37□□□□□ -0.59
SMARCA2-232ENST00000634989 DPYSL4O14531 572 aa11.36□□□□□ -0.59
SMARCA2-232ENST00000634989 DSG2Q14126 1118 aa11.36□□□□□ -0.59
SMARCA2-232ENST00000634989 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
SMARCA2-232ENST00000634989 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
SMARCA2-232ENST00000634989 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
SMARCA2-232ENST00000634989 FOXK1P85037 733 aa11.35□□□□□ -0.59
SMARCA2-232ENST00000634989 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
SMARCA2-232ENST00000634989 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
SMARCA2-232ENST00000634989 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
SMARCA2-232ENST00000634989 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
SMARCA2-232ENST00000634989 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-232ENST00000634989 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-232ENST00000634989 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-232ENST00000634989 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
SMARCA2-232ENST00000634989 ARXQ96QS3 562 aa11.28□□□□□ -0.6
SMARCA2-232ENST00000634989 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
SMARCA2-232ENST00000634989 KIF3CO14782 793 aa11.25□□□□□ -0.61
SMARCA2-232ENST00000634989 G3V3G9 751 aa11.24□□□□□ -0.61
SMARCA2-232ENST00000634989 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
SMARCA2-232ENST00000634989 TRIM66O15016 1216 aa11.23□□□□□ -0.61
SMARCA2-232ENST00000634989 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-232ENST00000634989 GPR37O15354 613 aa11.22□□□□□ -0.61
SMARCA2-232ENST00000634989 PDE4DQ08499 809 aa11.21□□□□□ -0.61
SMARCA2-232ENST00000634989 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
SMARCA2-232ENST00000634989 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
SMARCA2-232ENST00000634989 HOXB3P14651 431 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-232ENST00000634989 FAM163AQ96GL9 167 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-232ENST00000634989 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-232ENST00000634989 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
SMARCA2-232ENST00000634989 PTGER2P43116 358 aa11.15□□□□□ -0.62
SMARCA2-232ENST00000634989 MAP2K5Q13163 448 aa11.15□□□□□ -0.62
SMARCA2-232ENST00000634989 ST18O60284 1047 aa11.14□□□□□ -0.63
SMARCA2-232ENST00000634989 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
SMARCA2-232ENST00000634989 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
SMARCA2-232ENST00000634989 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
SMARCA2-232ENST00000634989 OSBPP22059 807 aa11.12□□□□□ -0.63
SMARCA2-232ENST00000634989 GNPATO15228 680 aa11.11□□□□□ -0.63
SMARCA2-232ENST00000634989 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA2-232ENST00000634989 TBC1D12O60347 775 aa11.1□□□□□ -0.63
SMARCA2-232ENST00000634989 HIC1Q14526 733 aa11.1□□□□□ -0.63
SMARCA2-232ENST00000634989 AMHR2Q16671 573 aa11.1□□□□□ -0.63
SMARCA2-232ENST00000634989 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
SMARCA2-232ENST00000634989 IRF6O14896 467 aa11.09□□□□□ -0.63
SMARCA2-232ENST00000634989 FCHSD2O94868 740 aa11.09□□□□□ -0.63
SMARCA2-232ENST00000634989 HOMEZQ8IX15 550 aa11.08□□□□□ -0.64
SMARCA2-232ENST00000634989 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-232ENST00000634989 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
SMARCA2-232ENST00000634989 DDX12PQ92771 950 aa11.05□□□□□ -0.64
SMARCA2-232ENST00000634989 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCA2-232ENST00000634989 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
SMARCA2-232ENST00000634989 EVI5O60447 810 aa11.04□□□□□ -0.64
SMARCA2-232ENST00000634989 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
SMARCA2-232ENST00000634989 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
SMARCA2-232ENST00000634989 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
SMARCA2-232ENST00000634989 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
SMARCA2-232ENST00000634989 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms