RNA–Protein interactions for RNA: ENST00000630712.2

TCF4-272, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-272ENST00000630712 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
TCF4-272ENST00000630712 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
TCF4-272ENST00000630712 MYT1LQ9UL68 1186 aa9.29□□□□□ -0.92
TCF4-272ENST00000630712 STK24Q9Y6E0 443 aa9.29□□□□□ -0.92
TCF4-272ENST00000630712 NLRP6P59044 892 aa9.27□□□□□ -0.93
TCF4-272ENST00000630712 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
TCF4-272ENST00000630712 ARSIQ5FYB1 569 aa9.25□□□□□ -0.93
TCF4-272ENST00000630712 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
TCF4-272ENST00000630712 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
TCF4-272ENST00000630712 STK25O00506 426 aa9.24□□□□□ -0.93
TCF4-272ENST00000630712 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
TCF4-272ENST00000630712 KHSRPQ92945 711 aaKnown RBP eCLIP9.24□□□□□ -0.933e-7■■■■□ 23.2
TCF4-272ENST00000630712 ZSWIM6Q9HCJ5 1215 aa9.24□□□□□ -0.93
TCF4-272ENST00000630712 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
TCF4-272ENST00000630712 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
TCF4-272ENST00000630712 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
TCF4-272ENST00000630712 MYT1Q01538 1121 aa9.18□□□□□ -0.94
TCF4-272ENST00000630712 C2orf72A6NCS6 295 aa9.17□□□□□ -0.94
TCF4-272ENST00000630712 RGL2O15211 777 aa9.17□□□□□ -0.94
TCF4-272ENST00000630712 PKD2Q13563 968 aa9.16□□□□□ -0.94
TCF4-272ENST00000630712 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.94
TCF4-272ENST00000630712 KIF3CO14782 793 aa9.14□□□□□ -0.95
TCF4-272ENST00000630712 NUDT7P0C024 238 aa9.12□□□□□ -0.95
TCF4-272ENST00000630712 PTGER2P43116 358 aa9.1□□□□□ -0.95
TCF4-272ENST00000630712 LSM11P83369 360 aaKnown RBP eCLIP9.1□□□□□ -0.95
TCF4-272ENST00000630712 PPP1R37O75864 691 aa9.09□□□□□ -0.95
TCF4-272ENST00000630712 TMC2Q8TDI7 906 aa9.08□□□□□ -0.96
TCF4-272ENST00000630712 LHX6Q9UPM6 363 aa9.08□□□□□ -0.96
TCF4-272ENST00000630712 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
TCF4-272ENST00000630712 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
TCF4-272ENST00000630712 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
TCF4-272ENST00000630712 SLC34A2O95436 690 aa9.02□□□□□ -0.97
TCF4-272ENST00000630712 PLA2G2EQ9NZK7 142 aa9□□□□□ -0.97
TCF4-272ENST00000630712 PBX2P40425 430 aa8.98□□□□□ -0.97
TCF4-272ENST00000630712 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
TCF4-272ENST00000630712 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
TCF4-272ENST00000630712 ARHGAP33O14559 1287 aa8.93□□□□□ -0.98
TCF4-272ENST00000630712 CHGAP10645 457 aaKnown RBP8.93□□□□□ -0.98
TCF4-272ENST00000630712 FOXK1P85037 733 aa8.93□□□□□ -0.98
TCF4-272ENST00000630712 ADGRD1Q6QNK2 874 aa8.93□□□□□ -0.98
TCF4-272ENST00000630712 PTCD2Q8WV60 388 aaKnown RBP8.93□□□□□ -0.98
TCF4-272ENST00000630712 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
TCF4-272ENST00000630712 PSEN2P49810 448 aa8.92□□□□□ -0.98
TCF4-272ENST00000630712 DSG2Q14126 1118 aa8.92□□□□□ -0.98
TCF4-272ENST00000630712 HS6ST3Q8IZP7 471 aa8.92□□□□□ -0.98
TCF4-272ENST00000630712 GPHNQ9NQX3 736 aaPredicted RBP8.92□□□□□ -0.98
TCF4-272ENST00000630712 KDM4FA0A1W2PPD8 638 aa8.91□□□□□ -0.98
TCF4-272ENST00000630712 PSDA5PKW4 1024 aaPredicted RBP8.9□□□□□ -0.98
TCF4-272ENST00000630712 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
TCF4-272ENST00000630712 TBC1D12O60347 775 aa8.86□□□□□ -0.99
TCF4-272ENST00000630712 UPF1Q92900 1129 aaKnown RBP eCLIP8.86□□□□□ -0.99
TCF4-272ENST00000630712 HRO43593 1189 aa8.85□□□□□ -0.99
TCF4-272ENST00000630712 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
TCF4-272ENST00000630712 PPP4R3BQ5MIZ7 849 aa8.85□□□□□ -0.99
TCF4-272ENST00000630712 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
TCF4-272ENST00000630712 TK2O00142 265 aa8.82□□□□□ -1
TCF4-272ENST00000630712 KCNK17Q96T54 332 aa8.82□□□□□ -1
TCF4-272ENST00000630712 STAC3Q96MF2 364 aa8.81□□□□□ -1
TCF4-272ENST00000630712 OXER1Q8TDS5 423 aa8.79□□□□□ -1
TCF4-272ENST00000630712 ZNF454Q8N9F8 522 aa8.78□□□□□ -1
TCF4-272ENST00000630712 CRISPLD2Q9H0B8 497 aa8.78□□□□□ -1
TCF4-272ENST00000630712 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
TCF4-272ENST00000630712 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
TCF4-272ENST00000630712 PTPN5P54829 565 aa8.76□□□□□ -1.01
TCF4-272ENST00000630712 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
TCF4-272ENST00000630712 RYDENQ9NUL5 291 aaKnown RBP8.75□□□□□ -1.01
TCF4-272ENST00000630712 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
TCF4-272ENST00000630712 NCKAP5LQ9HCH0 1330 aa8.75□□□□□ -1.01
TCF4-272ENST00000630712 PDE4AP27815 886 aa8.74□□□□□ -1.01
TCF4-272ENST00000630712 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
TCF4-272ENST00000630712 FOSBP53539 338 aa8.71□□□□□ -1.02
TCF4-272ENST00000630712 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.02
TCF4-272ENST00000630712 GTPBP6O43824 516 aaPredicted RBP8.7□□□□□ -1.02
TCF4-272ENST00000630712 EVI5O60447 810 aa8.7□□□□□ -1.02
TCF4-272ENST00000630712 LARP6Q9BRS8 491 aaKnown RBP8.7□□□□□ -1.02
TCF4-272ENST00000630712 PTPREP23469 700 aa8.69□□□□□ -1.02
TCF4-272ENST00000630712 BHMG1C9JSJ3 638 aaPredicted RBP8.67□□□□□ -1.02
TCF4-272ENST00000630712 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
TCF4-272ENST00000630712 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
TCF4-272ENST00000630712 GOLGA8CPA6NN73 597 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
TCF4-272ENST00000630712 ZBED2Q9BTP6 218 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 SLC4A5Q9BY07 1137 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
TCF4-272ENST00000630712 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
TCF4-272ENST00000630712 THSD4Q6ZMP0 1018 aa8.64□□□□□ -1.03
TCF4-272ENST00000630712 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
TCF4-272ENST00000630712 WNT2BQ93097 391 aa8.64□□□□□ -1.03
TCF4-272ENST00000630712 IRX2Q9BZI1 471 aaPredicted RBP8.64□□□□□ -1.03
TCF4-272ENST00000630712 EMILIN3Q9NT22 766 aa8.62□□□□□ -1.03
TCF4-272ENST00000630712 A0A0G2JS52 829 aa8.61□□□□□ -1.03
TCF4-272ENST00000630712 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
TCF4-272ENST00000630712 MFSD10Q14728 455 aa8.61□□□□□ -1.03
TCF4-272ENST00000630712 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
TCF4-272ENST00000630712 CADPS2Q86UW7 1296 aa8.59□□□□□ -1.03
TCF4-272ENST00000630712 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
TCF4-272ENST00000630712 PROX2Q3B8N5 592 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms