RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PHLDB1Q86UU1 1377 aa17.9■□□□□ 0.46
DDX41-219ENST00000629036 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
DDX41-219ENST00000629036 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
DDX41-219ENST00000629036 AKNAQ7Z591 1439 aa17.87■□□□□ 0.45
DDX41-219ENST00000629036 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
DDX41-219ENST00000629036 MAP3K1Q13233 1512 aa17.85■□□□□ 0.45
DDX41-219ENST00000629036 ITSN2Q9NZM3 1697 aa17.85■□□□□ 0.45
DDX41-219ENST00000629036 ABCC1P33527 1531 aa17.84■□□□□ 0.45
DDX41-219ENST00000629036 SIGLEC1Q9BZZ2 1709 aa17.84■□□□□ 0.45
DDX41-219ENST00000629036 ARHGAP5Q13017 1502 aa17.83■□□□□ 0.45
DDX41-219ENST00000629036 ARHGEF40Q8TER5 1519 aa17.83■□□□□ 0.45
DDX41-219ENST00000629036 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.44
DDX41-219ENST00000629036 LMTK3Q96Q04 1460 aa17.82■□□□□ 0.44
DDX41-219ENST00000629036 KDM5CP41229 1560 aa17.82■□□□□ 0.44
DDX41-219ENST00000629036 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
DDX41-219ENST00000629036 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
DDX41-219ENST00000629036 DENND4BO75064 1496 aaPredicted RBP17.81■□□□□ 0.44
DDX41-219ENST00000629036 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
DDX41-219ENST00000629036 ADAMTSL3P82987 1691 aa17.8■□□□□ 0.44
DDX41-219ENST00000629036 ARHGEF12Q9NZN5 1544 aa17.8■□□□□ 0.44
DDX41-219ENST00000629036 PTPRMP28827 1452 aa17.79■□□□□ 0.44
DDX41-219ENST00000629036 LRRC9Q6ZRR7 1453 aa17.78■□□□□ 0.44
DDX41-219ENST00000629036 RAPGEF3O95398 923 aa17.77■□□□□ 0.44
DDX41-219ENST00000629036 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.43
DDX41-219ENST00000629036 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
DDX41-219ENST00000629036 NCOA2Q15596 1464 aa17.75■□□□□ 0.43
DDX41-219ENST00000629036 MADDQ8WXG6 1647 aa17.73■□□□□ 0.43
DDX41-219ENST00000629036 ZFYVE16Q7Z3T8 1539 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 BCORL1Q5H9F3 1711 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 KIDINS220Q9ULH0 1771 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 EFCAB2Q5VUJ9 269 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
DDX41-219ENST00000629036 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
DDX41-219ENST00000629036 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
DDX41-219ENST00000629036 TRAPPC8Q9Y2L5 1435 aa17.7■□□□□ 0.42
DDX41-219ENST00000629036 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
DDX41-219ENST00000629036 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
DDX41-219ENST00000629036 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
DDX41-219ENST00000629036 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
DDX41-219ENST00000629036 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
DDX41-219ENST00000629036 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
DDX41-219ENST00000629036 REREQ9P2R6 1566 aa17.66■□□□□ 0.42
DDX41-219ENST00000629036 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
DDX41-219ENST00000629036 MLH3Q9UHC1 1453 aa17.66■□□□□ 0.42
DDX41-219ENST00000629036 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
DDX41-219ENST00000629036 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
DDX41-219ENST00000629036 HSPA2P54652 639 aa17.64■□□□□ 0.41
DDX41-219ENST00000629036 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
DDX41-219ENST00000629036 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
DDX41-219ENST00000629036 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
DDX41-219ENST00000629036 DISP3Q9P2K9 1392 aa17.63■□□□□ 0.41
DDX41-219ENST00000629036 ARHGEF5Q12774 1597 aa17.61■□□□□ 0.41
DDX41-219ENST00000629036 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
DDX41-219ENST00000629036 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
DDX41-219ENST00000629036 ATP7AQ04656 1500 aa17.6■□□□□ 0.41
DDX41-219ENST00000629036 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
DDX41-219ENST00000629036 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
DDX41-219ENST00000629036 ATP10AO60312 1499 aa17.59■□□□□ 0.41
DDX41-219ENST00000629036 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
DDX41-219ENST00000629036 SOCS7O14512 581 aa17.59■□□□□ 0.41
DDX41-219ENST00000629036 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.41
DDX41-219ENST00000629036 C9orf84Q5VXU9 1444 aa17.58■□□□□ 0.41
DDX41-219ENST00000629036 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
DDX41-219ENST00000629036 CROCC2H7BZ55 1655 aa17.57■□□□□ 0.4
DDX41-219ENST00000629036 FER1L4A9Z1Z3 1794 aa17.56■□□□□ 0.4
DDX41-219ENST00000629036 AGLP35573 1532 aa17.55■□□□□ 0.4
DDX41-219ENST00000629036 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
DDX41-219ENST00000629036 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
DDX41-219ENST00000629036 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
DDX41-219ENST00000629036 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
DDX41-219ENST00000629036 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX41-219ENST00000629036 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
DDX41-219ENST00000629036 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
DDX41-219ENST00000629036 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
DDX41-219ENST00000629036 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
DDX41-219ENST00000629036 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
DDX41-219ENST00000629036 RTEL1-TNFRSF6BF6WH68 1400 aa17.48■□□□□ 0.39
DDX41-219ENST00000629036 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
DDX41-219ENST00000629036 A2MP01023 1474 aa17.44■□□□□ 0.38
DDX41-219ENST00000629036 MLECQ14165 292 aa17.44■□□□□ 0.38
DDX41-219ENST00000629036 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
DDX41-219ENST00000629036 PREX1Q8TCU6 1659 aa17.43■□□□□ 0.38
DDX41-219ENST00000629036 MROH2AA6NES4 1674 aa17.42■□□□□ 0.38
DDX41-219ENST00000629036 C3P01024 1663 aa17.42■□□□□ 0.38
DDX41-219ENST00000629036 STRCQ7RTU9 1775 aa17.41■□□□□ 0.38
DDX41-219ENST00000629036 ABCC5O15440 1437 aa17.41■□□□□ 0.38
DDX41-219ENST00000629036 APLP2Q06481 763 aa17.41■□□□□ 0.38
DDX41-219ENST00000629036 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.38
DDX41-219ENST00000629036 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.37
DDX41-219ENST00000629036 DAPK1P53355 1430 aa17.38■□□□□ 0.37
DDX41-219ENST00000629036 MROH1Q8NDA8 1641 aa17.38■□□□□ 0.37
DDX41-219ENST00000629036 CLTCQ00610 1675 aaKnown RBP17.38■□□□□ 0.37
DDX41-219ENST00000629036 RSPH4AQ5TD94 716 aa17.36■□□□□ 0.37
DDX41-219ENST00000629036 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
DDX41-219ENST00000629036 DEPDC5O75140 1603 aa17.33■□□□□ 0.37
DDX41-219ENST00000629036 ADGRL2O95490 1459 aa17.33■□□□□ 0.37
DDX41-219ENST00000629036 MYT1LQ9UL68 1186 aa17.32■□□□□ 0.36
DDX41-219ENST00000629036 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms