RNA–Protein interactions for RNA: ENST00000627309.1

LINC00216-202, long intergenic non-protein coding RNA 216, humanhuman

Gene LINC00216, Length 1,115 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-202ENST00000627309 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
LINC00216-202ENST00000627309 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
LINC00216-202ENST00000627309 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
LINC00216-202ENST00000627309 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
LINC00216-202ENST00000627309 EMP3P54852 163 aa12.94□□□□□ -0.34
LINC00216-202ENST00000627309 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
LINC00216-202ENST00000627309 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
LINC00216-202ENST00000627309 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
LINC00216-202ENST00000627309 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
LINC00216-202ENST00000627309 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
LINC00216-202ENST00000627309 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
LINC00216-202ENST00000627309 HOXB1P14653 301 aaPredicted RBP12.87□□□□□ -0.35
LINC00216-202ENST00000627309 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
LINC00216-202ENST00000627309 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
LINC00216-202ENST00000627309 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
LINC00216-202ENST00000627309 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
LINC00216-202ENST00000627309 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
LINC00216-202ENST00000627309 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
LINC00216-202ENST00000627309 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
LINC00216-202ENST00000627309 KIF3CO14782 793 aa12.78□□□□□ -0.36
LINC00216-202ENST00000627309 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
LINC00216-202ENST00000627309 BCANQ96GW7 911 aa12.78□□□□□ -0.36
LINC00216-202ENST00000627309 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
LINC00216-202ENST00000627309 PPP1R37O75864 691 aa12.77□□□□□ -0.37
LINC00216-202ENST00000627309 ERBB3P21860 1342 aa12.76□□□□□ -0.37
LINC00216-202ENST00000627309 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
LINC00216-202ENST00000627309 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
LINC00216-202ENST00000627309 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
LINC00216-202ENST00000627309 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
LINC00216-202ENST00000627309 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
LINC00216-202ENST00000627309 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
LINC00216-202ENST00000627309 SLC34A2O95436 690 aa12.67□□□□□ -0.38
LINC00216-202ENST00000627309 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
LINC00216-202ENST00000627309 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
LINC00216-202ENST00000627309 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
LINC00216-202ENST00000627309 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
LINC00216-202ENST00000627309 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
LINC00216-202ENST00000627309 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
LINC00216-202ENST00000627309 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
LINC00216-202ENST00000627309 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
LINC00216-202ENST00000627309 FOXK1P85037 733 aa12.6□□□□□ -0.39
LINC00216-202ENST00000627309 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
LINC00216-202ENST00000627309 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
LINC00216-202ENST00000627309 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00216-202ENST00000627309 NUDT7P0C024 238 aa12.56□□□□□ -0.4
LINC00216-202ENST00000627309 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
LINC00216-202ENST00000627309 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
LINC00216-202ENST00000627309 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
LINC00216-202ENST00000627309 DSG2Q14126 1118 aa12.52□□□□□ -0.41
LINC00216-202ENST00000627309 TBC1D12O60347 775 aa12.51□□□□□ -0.41
LINC00216-202ENST00000627309 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
LINC00216-202ENST00000627309 PDE4AP27815 886 aa12.49□□□□□ -0.41
LINC00216-202ENST00000627309 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
LINC00216-202ENST00000627309 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
LINC00216-202ENST00000627309 PBX2P40425 430 aa12.46□□□□□ -0.41
LINC00216-202ENST00000627309 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
LINC00216-202ENST00000627309 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
LINC00216-202ENST00000627309 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
LINC00216-202ENST00000627309 PTGER2P43116 358 aa12.41□□□□□ -0.42
LINC00216-202ENST00000627309 LSM11P83369 360 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00216-202ENST00000627309 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
LINC00216-202ENST00000627309 OXER1Q8TDS5 423 aa12.39□□□□□ -0.43
LINC00216-202ENST00000627309 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
LINC00216-202ENST00000627309 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
LINC00216-202ENST00000627309 NBR1Q14596 966 aa12.36□□□□□ -0.43
LINC00216-202ENST00000627309 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
LINC00216-202ENST00000627309 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
LINC00216-202ENST00000627309 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00216-202ENST00000627309 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
LINC00216-202ENST00000627309 RNF166Q96A37 237 aaPredicted RBP12.34□□□□□ -0.43
LINC00216-202ENST00000627309 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
LINC00216-202ENST00000627309 MFSD10Q14728 455 aa12.33□□□□□ -0.44
LINC00216-202ENST00000627309 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
LINC00216-202ENST00000627309 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
LINC00216-202ENST00000627309 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
LINC00216-202ENST00000627309 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
LINC00216-202ENST00000627309 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
LINC00216-202ENST00000627309 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
LINC00216-202ENST00000627309 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
LINC00216-202ENST00000627309 TK2O00142 265 aa12.23□□□□□ -0.45
LINC00216-202ENST00000627309 EVI5O60447 810 aa12.23□□□□□ -0.45
LINC00216-202ENST00000627309 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
LINC00216-202ENST00000627309 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
LINC00216-202ENST00000627309 PSEN2P49810 448 aa12.21□□□□□ -0.45
LINC00216-202ENST00000627309 FOSBP53539 338 aa12.2□□□□□ -0.46
LINC00216-202ENST00000627309 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
LINC00216-202ENST00000627309 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
LINC00216-202ENST00000627309 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
LINC00216-202ENST00000627309 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
LINC00216-202ENST00000627309 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
LINC00216-202ENST00000627309 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
LINC00216-202ENST00000627309 PTPREP23469 700 aa12.15□□□□□ -0.46
LINC00216-202ENST00000627309 CAMK2BQ13554 666 aa12.15□□□□□ -0.46
LINC00216-202ENST00000627309 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
LINC00216-202ENST00000627309 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
LINC00216-202ENST00000627309 HRO43593 1189 aa12.13□□□□□ -0.47
LINC00216-202ENST00000627309 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
LINC00216-202ENST00000627309 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
LINC00216-202ENST00000627309 VPS9D1Q9Y2B5 631 aa12.09□□□□□ -0.47
LINC00216-202ENST00000627309 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms