RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 PPP1R15BQ5SWA1 713 aa14.08□□□□□ -0.16
LPCAT3-213ENST00000620843 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
LPCAT3-213ENST00000620843 SEMA3EO15041 775 aa14.06□□□□□ -0.16
LPCAT3-213ENST00000620843 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
LPCAT3-213ENST00000620843 G3V3G9 751 aa14.05□□□□□ -0.16
LPCAT3-213ENST00000620843 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
LPCAT3-213ENST00000620843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
LPCAT3-213ENST00000620843 TMEM121BQ9BXQ6 578 aaPredicted RBP14.05□□□□□ -0.16
LPCAT3-213ENST00000620843 TMC2Q8TDI7 906 aa14.04□□□□□ -0.16
LPCAT3-213ENST00000620843 TULP1O00294 542 aaPredicted RBP14.03□□□□□ -0.16
LPCAT3-213ENST00000620843 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
LPCAT3-213ENST00000620843 SEC24BO95487 1268 aa14.02□□□□□ -0.17
LPCAT3-213ENST00000620843 DSG2Q14126 1118 aa14.02□□□□□ -0.17
LPCAT3-213ENST00000620843 TESPA1A2RU30 521 aaPredicted RBP14.01□□□□□ -0.17
LPCAT3-213ENST00000620843 COLQQ9Y215 455 aaPredicted RBP14□□□□□ -0.17
LPCAT3-213ENST00000620843 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
LPCAT3-213ENST00000620843 FOXK1P85037 733 aa13.97□□□□□ -0.17
LPCAT3-213ENST00000620843 SLC39A7Q92504 469 aa13.97□□□□□ -0.17
LPCAT3-213ENST00000620843 C2orf72A6NCS6 295 aa13.96□□□□□ -0.17
LPCAT3-213ENST00000620843 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
LPCAT3-213ENST00000620843 KIF3CO14782 793 aa13.94□□□□□ -0.18
LPCAT3-213ENST00000620843 C7P10643 843 aa13.93□□□□□ -0.18
LPCAT3-213ENST00000620843 PLPP6Q8IY26 295 aa13.93□□□□□ -0.18
LPCAT3-213ENST00000620843 POTEFA5A3E0 1075 aa13.92□□□□□ -0.18
LPCAT3-213ENST00000620843 DPYSL4O14531 572 aa13.92□□□□□ -0.18
LPCAT3-213ENST00000620843 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
LPCAT3-213ENST00000620843 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
LPCAT3-213ENST00000620843 SMYD5Q6GMV2 418 aa13.9□□□□□ -0.18
LPCAT3-213ENST00000620843 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
LPCAT3-213ENST00000620843 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
LPCAT3-213ENST00000620843 MLLT3P42568 568 aaPredicted RBP13.85□□□□□ -0.19
LPCAT3-213ENST00000620843 PDIA6Q15084 440 aa13.84□□□□□ -0.19
LPCAT3-213ENST00000620843 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
LPCAT3-213ENST00000620843 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
LPCAT3-213ENST00000620843 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
LPCAT3-213ENST00000620843 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
LPCAT3-213ENST00000620843 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
LPCAT3-213ENST00000620843 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-213ENST00000620843 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
LPCAT3-213ENST00000620843 GPIHBP1Q8IV16 184 aa13.7□□□□□ -0.22
LPCAT3-213ENST00000620843 ZMYND10O75800 440 aa13.69□□□□□ -0.22
LPCAT3-213ENST00000620843 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
LPCAT3-213ENST00000620843 GRXCR2A6NFK2 248 aa13.67□□□□□ -0.22
LPCAT3-213ENST00000620843 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
LPCAT3-213ENST00000620843 TBC1D12O60347 775 aa13.65□□□□□ -0.22
LPCAT3-213ENST00000620843 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
LPCAT3-213ENST00000620843 PTCD2Q8WV60 388 aaKnown RBP13.63□□□□□ -0.23
LPCAT3-213ENST00000620843 EVI5O60447 810 aa13.62□□□□□ -0.23
LPCAT3-213ENST00000620843 DDX12PQ92771 950 aa13.61□□□□□ -0.23
LPCAT3-213ENST00000620843 SLC34A2O95436 690 aa13.6□□□□□ -0.23
LPCAT3-213ENST00000620843 PTGER2P43116 358 aa13.6□□□□□ -0.23
LPCAT3-213ENST00000620843 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
LPCAT3-213ENST00000620843 OSBPP22059 807 aa13.58□□□□□ -0.24
LPCAT3-213ENST00000620843 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
LPCAT3-213ENST00000620843 GPR37O15354 613 aa13.55□□□□□ -0.24
LPCAT3-213ENST00000620843 NUTM2FA1L443 756 aa13.54□□□□□ -0.24
LPCAT3-213ENST00000620843 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
LPCAT3-213ENST00000620843 POTEJP0CG39 1038 aa13.52□□□□□ -0.25
LPCAT3-213ENST00000620843 NEUROD2Q15784 382 aa13.52□□□□□ -0.25
LPCAT3-213ENST00000620843 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
LPCAT3-213ENST00000620843 PCDHGA4Q9Y5G9 962 aa13.51□□□□□ -0.25
LPCAT3-213ENST00000620843 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
LPCAT3-213ENST00000620843 AK7Q96M32 723 aa13.5□□□□□ -0.25
LPCAT3-213ENST00000620843 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
LPCAT3-213ENST00000620843 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
LPCAT3-213ENST00000620843 FCHSD2O94868 740 aa13.43□□□□□ -0.26
LPCAT3-213ENST00000620843 PHF14O94880 888 aa13.43□□□□□ -0.26
LPCAT3-213ENST00000620843 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
LPCAT3-213ENST00000620843 EPAS1Q99814 870 aa13.42□□□□□ -0.26
LPCAT3-213ENST00000620843 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
LPCAT3-213ENST00000620843 GNPATO15228 680 aa13.41□□□□□ -0.26
LPCAT3-213ENST00000620843 HIC1Q14526 733 aa13.41□□□□□ -0.26
LPCAT3-213ENST00000620843 TRIM66O15016 1216 aa13.4□□□□□ -0.26
LPCAT3-213ENST00000620843 EN1Q05925 392 aaPredicted RBP13.4□□□□□ -0.26
LPCAT3-213ENST00000620843 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
LPCAT3-213ENST00000620843 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
LPCAT3-213ENST00000620843 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
LPCAT3-213ENST00000620843 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
LPCAT3-213ENST00000620843 MAP2K5Q13163 448 aa13.39□□□□□ -0.27
LPCAT3-213ENST00000620843 PTGDRQ13258 359 aa13.39□□□□□ -0.27
LPCAT3-213ENST00000620843 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
LPCAT3-213ENST00000620843 MAP3K7O43318 606 aa13.38□□□□□ -0.27
LPCAT3-213ENST00000620843 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
LPCAT3-213ENST00000620843 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
LPCAT3-213ENST00000620843 FECHP22830 423 aa13.37□□□□□ -0.27
LPCAT3-213ENST00000620843 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
LPCAT3-213ENST00000620843 TYW1BQ6NUM6 668 aa13.36□□□□□ -0.27
LPCAT3-213ENST00000620843 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
LPCAT3-213ENST00000620843 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
LPCAT3-213ENST00000620843 GPBP1L1Q9HC44 474 aaPredicted RBP13.36□□□□□ -0.27
LPCAT3-213ENST00000620843 IRF6O14896 467 aa13.35□□□□□ -0.27
LPCAT3-213ENST00000620843 NUDT7P0C024 238 aa13.35□□□□□ -0.27
LPCAT3-213ENST00000620843 PDE4DQ08499 809 aa13.35□□□□□ -0.27
LPCAT3-213ENST00000620843 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
LPCAT3-213ENST00000620843 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.27
LPCAT3-213ENST00000620843 RIMBP2O15034 1052 aa13.34□□□□□ -0.27
LPCAT3-213ENST00000620843 FOSBP53539 338 aa13.32□□□□□ -0.28
LPCAT3-213ENST00000620843 TSR1Q2NL82 804 aaKnown RBP13.32□□□□□ -0.28
LPCAT3-213ENST00000620843 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
LPCAT3-213ENST00000620843 NPDC1Q9NQX5 325 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms