RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 TMEM121BQ9BXQ6 578 aaPredicted RBP8.37□□□□□ -1.07
MALAT1-216ENST00000620465 LARP6Q9BRS8 491 aaKnown RBP8.36□□□□□ -1.07
MALAT1-216ENST00000620465 NBR1Q14596 966 aa8.35□□□□□ -1.07
MALAT1-216ENST00000620465 MFSD10Q14728 455 aa8.35□□□□□ -1.07
MALAT1-216ENST00000620465 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
MALAT1-216ENST00000620465 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
MALAT1-216ENST00000620465 KCNV2Q8TDN2 545 aa8.33□□□□□ -1.08
MALAT1-216ENST00000620465 E2F4Q16254 413 aa8.32□□□□□ -1.08
MALAT1-216ENST00000620465 TMC2Q8TDI7 906 aa8.32□□□□□ -1.08
MALAT1-216ENST00000620465 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
MALAT1-216ENST00000620465 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
MALAT1-216ENST00000620465 C3orf67Q6ZVT6 689 aa8.29□□□□□ -1.08
MALAT1-216ENST00000620465 ARHGEF1Q92888 912 aaKnown RBP8.28□□□□□ -1.08
MALAT1-216ENST00000620465 C2orf72A6NCS6 295 aa8.27□□□□□ -1.09
MALAT1-216ENST00000620465 DSG2Q14126 1118 aa8.27□□□□□ -1.09
MALAT1-216ENST00000620465 KIF3CO14782 793 aa8.26□□□□□ -1.09
MALAT1-216ENST00000620465 FOXK1P85037 733 aa8.26□□□□□ -1.09
MALAT1-216ENST00000620465 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
MALAT1-216ENST00000620465 TMEM92Q6UXU6 159 aa8.24□□□□□ -1.09
MALAT1-216ENST00000620465 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
MALAT1-216ENST00000620465 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
MALAT1-216ENST00000620465 ARIH1Q9Y4X5 557 aaPredicted RBP8.22□□□□□ -1.09
MALAT1-216ENST00000620465 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
MALAT1-216ENST00000620465 TULP1O00294 542 aaPredicted RBP8.16□□□□□ -1.1
MALAT1-216ENST00000620465 DPYSL4O14531 572 aa8.16□□□□□ -1.1
MALAT1-216ENST00000620465 MAMSTRQ6ZN01 415 aa8.15□□□□□ -1.1
MALAT1-216ENST00000620465 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.1
MALAT1-216ENST00000620465 POTEB2H3BUK9 544 aa8.14□□□□□ -1.11
MALAT1-216ENST00000620465 SEMA3EO15041 775 aa8.14□□□□□ -1.11
MALAT1-216ENST00000620465 POTEJP0CG39 1038 aa8.14□□□□□ -1.11
MALAT1-216ENST00000620465 PDIA6Q15084 440 aa8.14□□□□□ -1.11
MALAT1-216ENST00000620465 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
MALAT1-216ENST00000620465 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
MALAT1-216ENST00000620465 UPF1Q92900 1129 aaKnown RBP eCLIP8.13□□□□□ -1.11
MALAT1-216ENST00000620465 OXER1Q8TDS5 423 aa8.12□□□□□ -1.11
MALAT1-216ENST00000620465 MAP3K9P80192 1104 aa8.11□□□□□ -1.11
MALAT1-216ENST00000620465 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
MALAT1-216ENST00000620465 SLC34A2O95436 690 aa8.1□□□□□ -1.11
MALAT1-216ENST00000620465 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
MALAT1-216ENST00000620465 ZNF316A6NFI3 1004 aaPredicted RBP8.09□□□□□ -1.11
MALAT1-216ENST00000620465 SMYD5Q6GMV2 418 aa8.09□□□□□ -1.11
MALAT1-216ENST00000620465 PTCD2Q8WV60 388 aaKnown RBP8.09□□□□□ -1.11
MALAT1-216ENST00000620465 TBC1D12O60347 775 aa8.08□□□□□ -1.12
MALAT1-216ENST00000620465 LMOD2Q6P5Q4 547 aa8.08□□□□□ -1.12
MALAT1-216ENST00000620465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
MALAT1-216ENST00000620465 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
MALAT1-216ENST00000620465 MLLT3P42568 568 aaPredicted RBP8.05□□□□□ -1.12
MALAT1-216ENST00000620465 DOK7Q18PE1 504 aa8.05□□□□□ -1.12
MALAT1-216ENST00000620465 EVI5O60447 810 aa8.04□□□□□ -1.12
MALAT1-216ENST00000620465 RIMBP2O15034 1052 aa8.03□□□□□ -1.12
MALAT1-216ENST00000620465 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
MALAT1-216ENST00000620465 HOXB3P14651 431 aaPredicted RBP8.01□□□□□ -1.13
MALAT1-216ENST00000620465 PTGER2P43116 358 aa8.01□□□□□ -1.13
MALAT1-216ENST00000620465 LHX8Q68G74 356 aa8□□□□□ -1.13
MALAT1-216ENST00000620465 ZSWIM6Q9HCJ5 1215 aa8□□□□□ -1.13
MALAT1-216ENST00000620465 GRXCR2A6NFK2 248 aa7.99□□□□□ -1.13
MALAT1-216ENST00000620465 SNPHO15079 494 aa7.99□□□□□ -1.13
MALAT1-216ENST00000620465 ZNF710Q8N1W2 664 aa7.99□□□□□ -1.13
MALAT1-216ENST00000620465 DDX12PQ92771 950 aa7.99□□□□□ -1.13
MALAT1-216ENST00000620465 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
MALAT1-216ENST00000620465 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
MALAT1-216ENST00000620465 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
MALAT1-216ENST00000620465 GPIHBP1Q8IV16 184 aa7.97□□□□□ -1.13
MALAT1-216ENST00000620465 KDM4FA0A1W2PPD8 638 aa7.95□□□□□ -1.14
MALAT1-216ENST00000620465 ARSIQ5FYB1 569 aa7.95□□□□□ -1.14
MALAT1-216ENST00000620465 ZC3H15Q8WU90 426 aaKnown RBP7.95□□□□□ -1.14
MALAT1-216ENST00000620465 PHF14O94880 888 aa7.94□□□□□ -1.14
MALAT1-216ENST00000620465 NUDT7P0C024 238 aa7.94□□□□□ -1.14
MALAT1-216ENST00000620465 OSBPP22059 807 aa7.94□□□□□ -1.14
MALAT1-216ENST00000620465 GPR153Q6NV75 609 aa7.94□□□□□ -1.14
MALAT1-216ENST00000620465 JPH4Q96JJ6 628 aa7.94□□□□□ -1.14
MALAT1-216ENST00000620465 EPAS1Q99814 870 aa7.93□□□□□ -1.14
MALAT1-216ENST00000620465 KHSRPQ92945 711 aaKnown RBP eCLIP7.92□□□□□ -1.141e-323■□□□□ 8.2
MALAT1-216ENST00000620465 NUTM2FA1L443 756 aa7.91□□□□□ -1.14
MALAT1-216ENST00000620465 TYW1BQ6NUM6 668 aa7.91□□□□□ -1.14
MALAT1-216ENST00000620465 FBXW7Q969H0 707 aa7.91□□□□□ -1.14
MALAT1-216ENST00000620465 PCDHGA10Q9Y5H3 936 aa7.91□□□□□ -1.14
MALAT1-216ENST00000620465 HOXB1P14653 301 aaPredicted RBP7.9□□□□□ -1.14
MALAT1-216ENST00000620465 FOSBP53539 338 aa7.9□□□□□ -1.14
MALAT1-216ENST00000620465 EN1Q05925 392 aaPredicted RBP7.9□□□□□ -1.14
MALAT1-216ENST00000620465 MAP3K7O43318 606 aa7.89□□□□□ -1.15
MALAT1-216ENST00000620465 ZMYND10O75800 440 aa7.89□□□□□ -1.15
MALAT1-216ENST00000620465 PRIM1P49642 420 aaKnown RBP7.89□□□□□ -1.15
MALAT1-216ENST00000620465 ZNF454Q8N9F8 522 aa7.89□□□□□ -1.15
MALAT1-216ENST00000620465 PSDA5PKW4 1024 aaPredicted RBP7.88□□□□□ -1.15
MALAT1-216ENST00000620465 GPR37O15354 613 aa7.88□□□□□ -1.15
MALAT1-216ENST00000620465 FCHSD2O94868 740 aa7.87□□□□□ -1.15
MALAT1-216ENST00000620465 BARGINQ6ZT62 677 aa7.87□□□□□ -1.15
MALAT1-216ENST00000620465 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
MALAT1-216ENST00000620465 RBM33Q96EV2 1170 aaKnown RBP7.87□□□□□ -1.15
MALAT1-216ENST00000620465 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
MALAT1-216ENST00000620465 HIC1Q14526 733 aa7.85□□□□□ -1.15
MALAT1-216ENST00000620465 PPP4R3BQ5MIZ7 849 aa7.85□□□□□ -1.15
MALAT1-216ENST00000620465 PTGDRQ13258 359 aa7.84□□□□□ -1.15
MALAT1-216ENST00000620465 TSR1Q2NL82 804 aaKnown RBP7.84□□□□□ -1.15
MALAT1-216ENST00000620465 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.15
MALAT1-216ENST00000620465 GNPATO15228 680 aa7.83□□□□□ -1.16
MALAT1-216ENST00000620465 KRI1Q8N9T8 703 aaKnown RBP7.83□□□□□ -1.16
MALAT1-216ENST00000620465 ADAM33Q9BZ11 813 aa7.83□□□□□ -1.16
MALAT1-216ENST00000620465 SLC24A3Q9HC58 644 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms