RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 PODXL2Q9NZ53 605 aa4.82□□□□□ -1.64
CBWD3-209ENST00000614377 BOLA1Q9Y3E2 137 aa4.82□□□□□ -1.64
CBWD3-209ENST00000614377 PLCB2Q00722 1185 aa4.81□□□□□ -1.64
CBWD3-209ENST00000614377 PDAP1Q13442 181 aaKnown RBP4.81□□□□□ -1.64
CBWD3-209ENST00000614377 VASPP50552 380 aaPredicted RBP4.81□□□□□ -1.64
CBWD3-209ENST00000614377 UBE2Q2Q8WVN8 375 aa4.81□□□□□ -1.64
CBWD3-209ENST00000614377 HOXB1P14653 301 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-209ENST00000614377 VARS2Q5ST30 1063 aaKnown RBP4.8□□□□□ -1.64
CBWD3-209ENST00000614377 HRCP23327 699 aa4.79□□□□□ -1.64
CBWD3-209ENST00000614377 DOK7Q18PE1 504 aa4.79□□□□□ -1.64
CBWD3-209ENST00000614377 CIZ1Q9ULV3 898 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-209ENST00000614377 CHRM1P11229 460 aaPredicted RBP4.78□□□□□ -1.64
CBWD3-209ENST00000614377 MYT1LQ9UL68 1186 aa4.78□□□□□ -1.64
CBWD3-209ENST00000614377 ILDR1Q86SU0 546 aaPredicted RBP4.78□□□□□ -1.64
CBWD3-209ENST00000614377 RIMBP2O15034 1052 aa4.77□□□□□ -1.65
CBWD3-209ENST00000614377 NPM2Q86SE8 214 aaKnown RBP4.77□□□□□ -1.65
CBWD3-209ENST00000614377 EFCAB3Q8N7B9 438 aa4.74□□□□□ -1.65
CBWD3-209ENST00000614377 ANKRD13DQ6ZTN6 518 aa4.74□□□□□ -1.65
CBWD3-209ENST00000614377 TMEM92Q6UXU6 159 aa4.73□□□□□ -1.65
CBWD3-209ENST00000614377 VSIG10Q8N0Z9 540 aa4.73□□□□□ -1.65
CBWD3-209ENST00000614377 DCAF8L2P0C7V8 631 aa4.72□□□□□ -1.65
CBWD3-209ENST00000614377 HAP1P54257 671 aaPredicted RBP4.72□□□□□ -1.65
CBWD3-209ENST00000614377 MICALL2Q8IY33 904 aa4.72□□□□□ -1.65
CBWD3-209ENST00000614377 ZNF687Q8N1G0 1237 aa4.72□□□□□ -1.65
CBWD3-209ENST00000614377 SPOCK2Q92563 424 aa4.72□□□□□ -1.65
CBWD3-209ENST00000614377 TMEM132AQ24JP5 1023 aa4.71□□□□□ -1.65
CBWD3-209ENST00000614377 CENPBP07199 599 aaPredicted RBP4.71□□□□□ -1.66
CBWD3-209ENST00000614377 IFNLR1Q8IU57 520 aaPredicted RBP4.7□□□□□ -1.66
CBWD3-209ENST00000614377 ARSIQ5FYB1 569 aa4.7□□□□□ -1.66
CBWD3-209ENST00000614377 GPR153Q6NV75 609 aa4.7□□□□□ -1.66
CBWD3-209ENST00000614377 KHSRPQ92945 711 aaKnown RBP eCLIP4.69□□□□□ -1.66
CBWD3-209ENST00000614377 ZSWIM6Q9HCJ5 1215 aa4.68□□□□□ -1.66
CBWD3-209ENST00000614377 C14orf37Q86TY3 774 aa4.68□□□□□ -1.66
CBWD3-209ENST00000614377 PTGER2P43116 358 aa4.67□□□□□ -1.66
CBWD3-209ENST00000614377 LSM11P83369 360 aaKnown RBP eCLIP4.66□□□□□ -1.66
CBWD3-209ENST00000614377 PHF8Q9UPP1 1060 aa4.66□□□□□ -1.66
CBWD3-209ENST00000614377 MS4A4AQ96JQ5 239 aa4.66□□□□□ -1.66
CBWD3-209ENST00000614377 ZNF316A6NFI3 1004 aaPredicted RBP4.65□□□□□ -1.66
CBWD3-209ENST00000614377 ANP32EQ9BTT0 268 aa4.65□□□□□ -1.67
CBWD3-209ENST00000614377 AXIN2Q9Y2T1 843 aa4.65□□□□□ -1.67
CBWD3-209ENST00000614377 PLA2G2EQ9NZK7 142 aa4.64□□□□□ -1.67
CBWD3-209ENST00000614377 PDIA4P13667 645 aaKnown RBP4.64□□□□□ -1.67
CBWD3-209ENST00000614377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.63□□□□□ -1.67
CBWD3-209ENST00000614377 ZFP91Q96JP5 570 aaPredicted RBP4.63□□□□□ -1.67
CBWD3-209ENST00000614377 PKNOX2Q96KN3 472 aa4.63□□□□□ -1.67
CBWD3-209ENST00000614377 NUDT7P0C024 238 aa4.63□□□□□ -1.67
CBWD3-209ENST00000614377 SOX12O15370 315 aa4.62□□□□□ -1.67
CBWD3-209ENST00000614377 RIOK3O14730 519 aaKnown RBP4.61□□□□□ -1.67
CBWD3-209ENST00000614377 RNF25Q96BH1 459 aaPredicted RBP4.61□□□□□ -1.67
CBWD3-209ENST00000614377 TRIM41Q8WV44 630 aa4.61□□□□□ -1.67
CBWD3-209ENST00000614377 ANO8Q9HCE9 1232 aaPredicted RBP4.61□□□□□ -1.67
CBWD3-209ENST00000614377 CDK11AQ9UQ88 783 aaPredicted RBP4.61□□□□□ -1.67
CBWD3-209ENST00000614377 HMGB1P09429 215 aaKnown RBP4.59□□□□□ -1.67
CBWD3-209ENST00000614377 POTEEQ6S8J3 1075 aa4.59□□□□□ -1.67
CBWD3-209ENST00000614377 LHX6Q9UPM6 363 aa4.59□□□□□ -1.67
CBWD3-209ENST00000614377 HCSTQ9UBK5 93 aa4.59□□□□□ -1.67
CBWD3-209ENST00000614377 C2orf72A6NCS6 295 aa4.59□□□□□ -1.68
CBWD3-209ENST00000614377 PBX2P40425 430 aa4.59□□□□□ -1.68
CBWD3-209ENST00000614377 VGFO15240 615 aaPredicted RBP4.58□□□□□ -1.68
CBWD3-209ENST00000614377 NLRP6P59044 892 aa4.58□□□□□ -1.68
CBWD3-209ENST00000614377 TRIM26Q12899 539 aaPredicted RBP4.58□□□□□ -1.68
CBWD3-209ENST00000614377 PDE4CQ08493 712 aa4.57□□□□□ -1.68
CBWD3-209ENST00000614377 BCL11BQ9C0K0 894 aaPredicted RBP4.57□□□□□ -1.68
CBWD3-209ENST00000614377 ADGRD1Q6QNK2 874 aa4.56□□□□□ -1.68
CBWD3-209ENST00000614377 PCDHGA4Q9Y5G9 962 aa4.56□□□□□ -1.68
CBWD3-209ENST00000614377 NEFLP07196 543 aa4.56□□□□□ -1.68
CBWD3-209ENST00000614377 STK24Q9Y6E0 443 aa4.56□□□□□ -1.68
CBWD3-209ENST00000614377 FBXO22Q8NEZ5 403 aa4.55□□□□□ -1.68
CBWD3-209ENST00000614377 KCTD12Q96CX2 325 aaKnown RBP4.55□□□□□ -1.68
CBWD3-209ENST00000614377 ACIN1Q9UKV3 1341 aaKnown RBP4.54□□□□□ -1.68
CBWD3-209ENST00000614377 FGD1P98174 961 aa4.54□□□□□ -1.68
CBWD3-209ENST00000614377 KIF3CO14782 793 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 PSEN2P49810 448 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 MFRPQ9BY79 579 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 SHROOM4Q9ULL8 1493 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 ARHGAP33O14559 1287 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 TAF7LQ5H9L4 462 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 TMC2Q8TDI7 906 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 LOC105371045A0A1W2PR82 267 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 DMRTA1Q5VZB9 504 aa4.53□□□□□ -1.68
CBWD3-209ENST00000614377 CDK11BP21127 795 aaKnown RBP4.52□□□□□ -1.69
CBWD3-209ENST00000614377 STK25O00506 426 aa4.52□□□□□ -1.69
CBWD3-209ENST00000614377 STAC3Q96MF2 364 aa4.52□□□□□ -1.69
CBWD3-209ENST00000614377 PTPN5P54829 565 aa4.51□□□□□ -1.69
CBWD3-209ENST00000614377 KDM2AQ9Y2K7 1162 aa4.51□□□□□ -1.69
CBWD3-209ENST00000614377 ERICH6BQ5W0A0 696 aa4.5□□□□□ -1.69
CBWD3-209ENST00000614377 SLC34A2O95436 690 aa4.5□□□□□ -1.69
CBWD3-209ENST00000614377 HSP90B1P14625 803 aaKnown RBP4.5□□□□□ -1.69
CBWD3-209ENST00000614377 PPARGC1BQ86YN6 1023 aaKnown RBP4.5□□□□□ -1.69
CBWD3-209ENST00000614377 CHMP4AQ9BY43 222 aa4.5□□□□□ -1.69
CBWD3-209ENST00000614377 SUPT5HO00267 1087 aaKnown RBP4.49□□□□□ -1.69
CBWD3-209ENST00000614377 HRO43593 1189 aa4.49□□□□□ -1.69
CBWD3-209ENST00000614377 PSDA5PKW4 1024 aaPredicted RBP4.48□□□□□ -1.69
CBWD3-209ENST00000614377 BRD2P25440 801 aaKnown RBP4.48□□□□□ -1.69
CBWD3-209ENST00000614377 KCNK17Q96T54 332 aa4.48□□□□□ -1.69
CBWD3-209ENST00000614377 TK2O00142 265 aa4.48□□□□□ -1.69
CBWD3-209ENST00000614377 UBTFP17480 764 aaKnown RBP4.48□□□□□ -1.69
CBWD3-209ENST00000614377 IRX2Q9BZI1 471 aaPredicted RBP4.47□□□□□ -1.69
CBWD3-209ENST00000614377 CCDC9Q9Y3X0 531 aaKnown RBP4.47□□□□□ -1.69
CBWD3-209ENST00000614377 PPP4R3BQ5MIZ7 849 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms