RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 TAF7LQ5H9L4 462 aa9.17□□□□□ -0.94
ABCA13-208ENST00000611776 HIRIP3Q9BW71 556 aaPredicted RBP9.17□□□□□ -0.94
ABCA13-208ENST00000611776 DNAJC5BQ9UF47 199 aa9.17□□□□□ -0.94
ABCA13-208ENST00000611776 ANP32CO43423 234 aa9.17□□□□□ -0.94
ABCA13-208ENST00000611776 ZNF526Q8TF50 670 aaPredicted RBP9.16□□□□□ -0.94
ABCA13-208ENST00000611776 BAZ1BQ9UIG0 1483 aaKnown RBP9.16□□□□□ -0.94
ABCA13-208ENST00000611776 NBPF8Q3BBV2 869 aa9.16□□□□□ -0.94
ABCA13-208ENST00000611776 NBPF14Q5TI25 921 aa9.16□□□□□ -0.94
ABCA13-208ENST00000611776 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
ABCA13-208ENST00000611776 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.94
ABCA13-208ENST00000611776 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
ABCA13-208ENST00000611776 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.94
ABCA13-208ENST00000611776 VPS53Q5VIR6 699 aa9.15□□□□□ -0.95
ABCA13-208ENST00000611776 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
ABCA13-208ENST00000611776 ZRANB1Q9UGI0 708 aa9.14□□□□□ -0.95
ABCA13-208ENST00000611776 SENP3-EIF4A1A0A087X0R7 540 aa9.14□□□□□ -0.95
ABCA13-208ENST00000611776 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
ABCA13-208ENST00000611776 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
ABCA13-208ENST00000611776 WDR43Q15061 677 aaKnown RBP eCLIP9.13□□□□□ -0.95
ABCA13-208ENST00000611776 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
ABCA13-208ENST00000611776 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
ABCA13-208ENST00000611776 NAP1L2Q9ULW6 460 aaPredicted RBP9.13□□□□□ -0.95
ABCA13-208ENST00000611776 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-208ENST00000611776 AMPHP49418 695 aa9.12□□□□□ -0.95
ABCA13-208ENST00000611776 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
ABCA13-208ENST00000611776 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
ABCA13-208ENST00000611776 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
ABCA13-208ENST00000611776 HSPA2P54652 639 aa9.11□□□□□ -0.95
ABCA13-208ENST00000611776 NGEFQ8N5V2 710 aa9.11□□□□□ -0.95
ABCA13-208ENST00000611776 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
ABCA13-208ENST00000611776 EIF5BO60841 1220 aaKnown RBP9.1□□□□□ -0.95
ABCA13-208ENST00000611776 TDRD9Q8NDG6 1382 aaKnown RBP9.1□□□□□ -0.95
ABCA13-208ENST00000611776 MYH16Q9H6N6 1097 aa9.1□□□□□ -0.95
ABCA13-208ENST00000611776 ESCO1Q5FWF5 840 aa9.1□□□□□ -0.95
ABCA13-208ENST00000611776 RBM33Q96EV2 1170 aaKnown RBP9.1□□□□□ -0.95
ABCA13-208ENST00000611776 WASHC2AQ641Q2 1341 aa9.09□□□□□ -0.95
ABCA13-208ENST00000611776 NUTM2GQ5VZR2 741 aa9.09□□□□□ -0.95
ABCA13-208ENST00000611776 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
ABCA13-208ENST00000611776 KCNJ4P48050 445 aa9.09□□□□□ -0.95
ABCA13-208ENST00000611776 POLD1P28340 1107 aa9.09□□□□□ -0.95
ABCA13-208ENST00000611776 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
ABCA13-208ENST00000611776 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
ABCA13-208ENST00000611776 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
ABCA13-208ENST00000611776 SPRYD3Q8NCJ5 442 aa9.08□□□□□ -0.96
ABCA13-208ENST00000611776 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
ABCA13-208ENST00000611776 CFAP53Q96M91 514 aa9.07□□□□□ -0.96
ABCA13-208ENST00000611776 BIN2Q9UBW5 565 aaPredicted RBP9.07□□□□□ -0.96
ABCA13-208ENST00000611776 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
ABCA13-208ENST00000611776 JPH4Q96JJ6 628 aa9.07□□□□□ -0.96
ABCA13-208ENST00000611776 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
ABCA13-208ENST00000611776 GORABQ5T7V8 394 aa9.06□□□□□ -0.96
ABCA13-208ENST00000611776 PPM1FP49593 454 aaPredicted RBP9.06□□□□□ -0.96
ABCA13-208ENST00000611776 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 RFX1P22670 979 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 FAM9BQ8IZU0 186 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 HDGFL2Q7Z4V5 671 aaPredicted RBP9.05□□□□□ -0.96
ABCA13-208ENST00000611776 NLRP2Q9NX02 1062 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 TXNDC2Q86VQ3 553 aa9.05□□□□□ -0.96
ABCA13-208ENST00000611776 RBM42Q9BTD8 480 aaKnown RBP9.04□□□□□ -0.96
ABCA13-208ENST00000611776 SPAG9O60271 1321 aaKnown RBP9.04□□□□□ -0.96
ABCA13-208ENST00000611776 HNRNPUQ00839 825 aaKnown RBP eCLIP9.04□□□□□ -0.96
ABCA13-208ENST00000611776 TCEAL9Q9UHQ7 104 aa9.03□□□□□ -0.96
ABCA13-208ENST00000611776 KCNA4P22459 653 aa9.03□□□□□ -0.96
ABCA13-208ENST00000611776 HSP90AA1P07900 732 aaKnown RBP9.03□□□□□ -0.96
ABCA13-208ENST00000611776 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
ABCA13-208ENST00000611776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.03□□□□□ -0.96
ABCA13-208ENST00000611776 CHMP4BP1P59074 171 aa9.02□□□□□ -0.96
ABCA13-208ENST00000611776 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
ABCA13-208ENST00000611776 DDX54Q8TDD1 881 aaKnown RBP9.02□□□□□ -0.97
ABCA13-208ENST00000611776 PDE4CQ08493 712 aa9.01□□□□□ -0.97
ABCA13-208ENST00000611776 C1orf141Q5JVX7 400 aa9.01□□□□□ -0.97
ABCA13-208ENST00000611776 TOM1L2Q6ZVM7 507 aa9.01□□□□□ -0.97
ABCA13-208ENST00000611776 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
ABCA13-208ENST00000611776 PPP6R1Q9UPN7 881 aa9□□□□□ -0.97
ABCA13-208ENST00000611776 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
ABCA13-208ENST00000611776 VPS37DQ86XT2 251 aa9□□□□□ -0.97
ABCA13-208ENST00000611776 FGD1P98174 961 aa9□□□□□ -0.97
ABCA13-208ENST00000611776 NUDCQ9Y266 331 aa9□□□□□ -0.97
ABCA13-208ENST00000611776 TTC5Q8N0Z6 440 aa9□□□□□ -0.97
ABCA13-208ENST00000611776 CRBNQ96SW2 442 aa9□□□□□ -0.97
ABCA13-208ENST00000611776 ANP32AP39687 249 aaKnown RBP9□□□□□ -0.97
ABCA13-208ENST00000611776 THEMISQ8N1K5 641 aaPredicted RBP9□□□□□ -0.97
ABCA13-208ENST00000611776 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
ABCA13-208ENST00000611776 CLIP1P30622 1438 aa8.99□□□□□ -0.97
ABCA13-208ENST00000611776 CA8P35219 290 aa8.99□□□□□ -0.97
ABCA13-208ENST00000611776 BICDL1Q6ZP65 573 aa8.99□□□□□ -0.97
ABCA13-208ENST00000611776 EP400NLQ6ZTU2 488 aa8.99□□□□□ -0.97
ABCA13-208ENST00000611776 POGZQ7Z3K3 1410 aa8.99□□□□□ -0.97
ABCA13-208ENST00000611776 RSF1Q96T23 1441 aaPredicted RBP8.99□□□□□ -0.97
ABCA13-208ENST00000611776 ZNF408Q9H9D4 720 aa8.98□□□□□ -0.97
ABCA13-208ENST00000611776 RTN4Q9NQC3 1192 aaKnown RBP8.97□□□□□ -0.97
ABCA13-208ENST00000611776 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.97
ABCA13-208ENST00000611776 CCDC180Q9P1Z9 1646 aa8.96□□□□□ -0.97
ABCA13-208ENST00000611776 PHF14O94880 888 aa8.96□□□□□ -0.97
ABCA13-208ENST00000611776 APBB1O00213 710 aa8.96□□□□□ -0.98
ABCA13-208ENST00000611776 CEBPAP49715 358 aaPredicted RBP8.96□□□□□ -0.98
ABCA13-208ENST00000611776 PMFBP1Q8TBY8 1022 aa8.96□□□□□ -0.98
ABCA13-208ENST00000611776 DNAJC5Q9H3Z4 198 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms