RNA–Protein interactions for RNA: ENST00000597573.1

PDE4C-212, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 603 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-212ENST00000597573 PLCH2O75038 1416 aa23.75■■□□□ 1.39
PDE4C-212ENST00000597573 CFDP1Q9UEE9 299 aaPredicted RBP23.74■■□□□ 1.39
PDE4C-212ENST00000597573 ARHGAP5Q13017 1502 aa23.73■■□□□ 1.39
PDE4C-212ENST00000597573 MAP3K4Q9Y6R4 1608 aa23.71■■□□□ 1.39
PDE4C-212ENST00000597573 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
PDE4C-212ENST00000597573 CD109Q6YHK3 1445 aa23.68■■□□□ 1.38
PDE4C-212ENST00000597573 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
PDE4C-212ENST00000597573 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
PDE4C-212ENST00000597573 SAMD9LQ8IVG5 1584 aa23.66■■□□□ 1.38
PDE4C-212ENST00000597573 FAM69CQ0P6D2 419 aa23.65■■□□□ 1.38
PDE4C-212ENST00000597573 EFCAB2Q5VUJ9 269 aa23.64■■□□□ 1.37
PDE4C-212ENST00000597573 CFAP74Q9C0B2 1584 aa23.64■■□□□ 1.37
PDE4C-212ENST00000597573 FANCAO15360 1455 aa23.63■■□□□ 1.37
PDE4C-212ENST00000597573 PLEKHH2Q8IVE3 1493 aa23.63■■□□□ 1.37
PDE4C-212ENST00000597573 ZNF644Q9H582 1327 aaPredicted RBP23.62■■□□□ 1.37
PDE4C-212ENST00000597573 PCGF6Q9BYE7 350 aa23.62■■□□□ 1.37
PDE4C-212ENST00000597573 ZNF777Q9ULD5 760 aaPredicted RBP23.62■■□□□ 1.37
PDE4C-212ENST00000597573 DNMT1P26358 1616 aaKnown RBP23.6■■□□□ 1.37
PDE4C-212ENST00000597573 ABCC1P33527 1531 aa23.59■■□□□ 1.37
PDE4C-212ENST00000597573 KIAA1107Q9UPP5 1409 aa23.59■■□□□ 1.37
PDE4C-212ENST00000597573 ARHGEF5Q12774 1597 aa23.58■■□□□ 1.37
PDE4C-212ENST00000597573 NEO1Q92859 1461 aa23.57■■□□□ 1.36
PDE4C-212ENST00000597573 SYCP2Q9BX26 1530 aa23.57■■□□□ 1.36
PDE4C-212ENST00000597573 PPRC1Q5VV67 1664 aaKnown RBP23.56■■□□□ 1.36
PDE4C-212ENST00000597573 DAPK1P53355 1430 aa23.55■■□□□ 1.36
PDE4C-212ENST00000597573 MBD5Q9P267 1494 aa23.55■■□□□ 1.36
PDE4C-212ENST00000597573 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
PDE4C-212ENST00000597573 ABCC5O15440 1437 aa23.53■■□□□ 1.36
PDE4C-212ENST00000597573 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
PDE4C-212ENST00000597573 TEX14Q8IWB6 1497 aa23.53■■□□□ 1.36
PDE4C-212ENST00000597573 ADGRL1O94910 1474 aa23.52■■□□□ 1.36
PDE4C-212ENST00000597573 ARHGEF12Q9NZN5 1544 aa23.52■■□□□ 1.36
PDE4C-212ENST00000597573 TSPOAP1O95153 1857 aa23.51■■□□□ 1.35
PDE4C-212ENST00000597573 CCDC141Q6ZP82 1450 aa23.51■■□□□ 1.35
PDE4C-212ENST00000597573 ITGAEP38570 1179 aa23.51■■□□□ 1.35
PDE4C-212ENST00000597573 SHANK2Q9UPX8 1470 aa23.5■■□□□ 1.35
PDE4C-212ENST00000597573 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
PDE4C-212ENST00000597573 RSPH4AQ5TD94 716 aa23.49■■□□□ 1.35
PDE4C-212ENST00000597573 HNRNPMP52272 730 aaKnown RBP eCLIP23.48■■□□□ 1.35
PDE4C-212ENST00000597573 SCAPERQ9BY12 1400 aa23.47■■□□□ 1.35
PDE4C-212ENST00000597573 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
PDE4C-212ENST00000597573 MAST1Q9Y2H9 1570 aa23.44■■□□□ 1.34
PDE4C-212ENST00000597573 TRAPPC8Q9Y2L5 1435 aa23.44■■□□□ 1.34
PDE4C-212ENST00000597573 ADGRL2O95490 1459 aa23.43■■□□□ 1.34
PDE4C-212ENST00000597573 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
PDE4C-212ENST00000597573 ROCK1Q13464 1354 aa23.42■■□□□ 1.34
PDE4C-212ENST00000597573 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
PDE4C-212ENST00000597573 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
PDE4C-212ENST00000597573 ZNF518AQ6AHZ1 1483 aa23.41■■□□□ 1.34
PDE4C-212ENST00000597573 DENND4BO75064 1496 aaPredicted RBP23.4■■□□□ 1.34
PDE4C-212ENST00000597573 TSPY4P0CV99 314 aa23.39■■□□□ 1.33
PDE4C-212ENST00000597573 TSPY10P0CW01 314 aa23.39■■□□□ 1.33
PDE4C-212ENST00000597573 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
PDE4C-212ENST00000597573 KDM5CP41229 1560 aa23.38■■□□□ 1.33
PDE4C-212ENST00000597573 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
PDE4C-212ENST00000597573 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
PDE4C-212ENST00000597573 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
PDE4C-212ENST00000597573 PLXNC1O60486 1568 aa23.35■■□□□ 1.33
PDE4C-212ENST00000597573 INO80Q9ULG1 1556 aaPredicted RBP23.35■■□□□ 1.33
PDE4C-212ENST00000597573 RTEL1-TNFRSF6BF6WH68 1400 aa23.35■■□□□ 1.33
PDE4C-212ENST00000597573 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
PDE4C-212ENST00000597573 ZFYVE16Q7Z3T8 1539 aa23.35■■□□□ 1.33
PDE4C-212ENST00000597573 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
PDE4C-212ENST00000597573 AFAP1Q8N556 730 aa23.34■■□□□ 1.33
PDE4C-212ENST00000597573 NAIPQ13075 1403 aa23.33■■□□□ 1.33
PDE4C-212ENST00000597573 FRMPD1Q5SYB0 1578 aa23.33■■□□□ 1.33
PDE4C-212ENST00000597573 SETD5Q9C0A6 1442 aa23.33■■□□□ 1.32
PDE4C-212ENST00000597573 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.32
PDE4C-212ENST00000597573 ATP7AQ04656 1500 aa23.32■■□□□ 1.32
PDE4C-212ENST00000597573 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
PDE4C-212ENST00000597573 ZMYM4Q5VZL5 1548 aa23.3■■□□□ 1.32
PDE4C-212ENST00000597573 RRP7BPQ9NSQ0 103 aa23.3■■□□□ 1.32
PDE4C-212ENST00000597573 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
PDE4C-212ENST00000597573 KIF15Q9NS87 1388 aa23.27■■□□□ 1.32
PDE4C-212ENST00000597573 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
PDE4C-212ENST00000597573 RAPGEF3O95398 923 aa23.27■■□□□ 1.32
PDE4C-212ENST00000597573 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
PDE4C-212ENST00000597573 COL17A1Q9UMD9 1497 aaPredicted RBP23.25■■□□□ 1.31
PDE4C-212ENST00000597573 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
PDE4C-212ENST00000597573 MAGI2Q86UL8 1455 aa23.22■■□□□ 1.31
PDE4C-212ENST00000597573 HRCP23327 699 aa23.21■■□□□ 1.31
PDE4C-212ENST00000597573 KDM6BO15054 1643 aa23.2■■□□□ 1.3
PDE4C-212ENST00000597573 ANKRD50Q9ULJ7 1429 aa23.2■■□□□ 1.3
PDE4C-212ENST00000597573 ABCA6Q8N139 1617 aa23.19■■□□□ 1.3
PDE4C-212ENST00000597573 MYT1LQ9UL68 1186 aa23.18■■□□□ 1.3
PDE4C-212ENST00000597573 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
PDE4C-212ENST00000597573 ERBINQ96RT1 1412 aa23.17■■□□□ 1.3
PDE4C-212ENST00000597573 ACIN1Q9UKV3 1341 aaKnown RBP23.14■■□□□ 1.3
PDE4C-212ENST00000597573 ARHGEF40Q8TER5 1519 aa23.14■■□□□ 1.3
PDE4C-212ENST00000597573 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.29
PDE4C-212ENST00000597573 A2MP01023 1474 aa23.13■■□□□ 1.29
PDE4C-212ENST00000597573 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
PDE4C-212ENST00000597573 EIF2AK4Q9P2K8 1649 aaKnown RBP23.12■■□□□ 1.29
PDE4C-212ENST00000597573 REREQ9P2R6 1566 aa23.09■■□□□ 1.29
PDE4C-212ENST00000597573 ATP10AO60312 1499 aa23.08■■□□□ 1.29
PDE4C-212ENST00000597573 UNC13BO14795 1591 aa23.08■■□□□ 1.29
PDE4C-212ENST00000597573 BCORL1Q5H9F3 1711 aa23.07■■□□□ 1.28
PDE4C-212ENST00000597573 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
PDE4C-212ENST00000597573 KDM5DQ9BY66 1539 aa23.04■■□□□ 1.28
PDE4C-212ENST00000597573 RNF17Q9BXT8 1623 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms