RNA–Protein interactions for RNA: ENST00000597026.5

COPE-206, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2

Gene COPE, Length 678 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-206ENST00000597026 ADAMTSL3P82987 1691 aa26.31■■□□□ 1.8
COPE-206ENST00000597026 BCORL1Q5H9F3 1711 aa26.3■■□□□ 1.8
COPE-206ENST00000597026 POGZQ7Z3K3 1410 aa26.29■■□□□ 1.8
COPE-206ENST00000597026 CEP162Q5TB80 1403 aa26.26■■□□□ 1.79
COPE-206ENST00000597026 ARHGAP5Q13017 1502 aa26.25■■□□□ 1.79
COPE-206ENST00000597026 ZFYVE16Q7Z3T8 1539 aa26.25■■□□□ 1.79
COPE-206ENST00000597026 CDK11AQ9UQ88 783 aaPredicted RBP26.23■■□□□ 1.79
COPE-206ENST00000597026 ITSN2Q9NZM3 1697 aa26.22■■□□□ 1.79
COPE-206ENST00000597026 KDM5CP41229 1560 aa26.22■■□□□ 1.79
COPE-206ENST00000597026 YEATS2Q9ULM3 1422 aa26.22■■□□□ 1.79
COPE-206ENST00000597026 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
COPE-206ENST00000597026 SCAPERQ9BY12 1400 aa26.21■■□□□ 1.79
COPE-206ENST00000597026 ABCC1P33527 1531 aa26.2■■□□□ 1.79
COPE-206ENST00000597026 MAGI2Q86UL8 1455 aa26.17■■□□□ 1.78
COPE-206ENST00000597026 HECW2Q9P2P5 1572 aa26.15■■□□□ 1.78
COPE-206ENST00000597026 ARHGEF12Q9NZN5 1544 aa26.14■■□□□ 1.77
COPE-206ENST00000597026 SAMD9LQ8IVG5 1584 aa26.13■■□□□ 1.77
COPE-206ENST00000597026 RIMS1Q86UR5 1692 aaKnown RBP26.12■■□□□ 1.77
COPE-206ENST00000597026 ZNF518AQ6AHZ1 1483 aa26.12■■□□□ 1.77
COPE-206ENST00000597026 ABCA6Q8N139 1617 aa26.11■■□□□ 1.77
COPE-206ENST00000597026 EFCAB2Q5VUJ9 269 aa26.11■■□□□ 1.77
COPE-206ENST00000597026 DIP2CQ9Y2E4 1556 aa26.1■■□□□ 1.77
COPE-206ENST00000597026 EHBP1L1Q8N3D4 1523 aa26.09■■□□□ 1.77
COPE-206ENST00000597026 PTPRMP28827 1452 aa26.09■■□□□ 1.77
COPE-206ENST00000597026 TIAM1Q13009 1591 aa26.07■■□□□ 1.76
COPE-206ENST00000597026 FER1L4A9Z1Z3 1794 aa26.07■■□□□ 1.76
COPE-206ENST00000597026 GPATCH8Q9UKJ3 1502 aaKnown RBP26.07■■□□□ 1.76
COPE-206ENST00000597026 KIDINS220Q9ULH0 1771 aa26.05■■□□□ 1.76
COPE-206ENST00000597026 TRAPPC8Q9Y2L5 1435 aa26.04■■□□□ 1.76
COPE-206ENST00000597026 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
COPE-206ENST00000597026 REREQ9P2R6 1566 aa26.03■■□□□ 1.76
COPE-206ENST00000597026 C9orf84Q5VXU9 1444 aa26.02■■□□□ 1.76
COPE-206ENST00000597026 ATP10AO60312 1499 aa26.01■■□□□ 1.75
COPE-206ENST00000597026 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
COPE-206ENST00000597026 MLH3Q9UHC1 1453 aa25.99■■□□□ 1.75
COPE-206ENST00000597026 MTUS2Q5JR59 1369 aa25.97■■□□□ 1.75
COPE-206ENST00000597026 ARID4BQ4LE39 1312 aaPredicted RBP25.97■■□□□ 1.75
COPE-206ENST00000597026 AFAP1Q8N556 730 aa25.97■■□□□ 1.75
COPE-206ENST00000597026 INO80Q9ULG1 1556 aaPredicted RBP25.96■■□□□ 1.75
COPE-206ENST00000597026 SUPT6HQ7KZ85 1726 aaKnown RBP25.96■■□□□ 1.75
COPE-206ENST00000597026 VPS8Q8N3P4 1428 aa25.96■■□□□ 1.75
COPE-206ENST00000597026 CCNB3Q8WWL7 1395 aa25.9■■□□□ 1.74
COPE-206ENST00000597026 NCOA2Q15596 1464 aa25.88■■□□□ 1.73
COPE-206ENST00000597026 AGLP35573 1532 aa25.87■■□□□ 1.73
COPE-206ENST00000597026 ATP7AQ04656 1500 aa25.87■■□□□ 1.73
COPE-206ENST00000597026 KIAA1107Q9UPP5 1409 aa25.87■■□□□ 1.73
COPE-206ENST00000597026 LMTK3Q96Q04 1460 aa25.86■■□□□ 1.73
COPE-206ENST00000597026 PLXNC1O60486 1568 aa25.86■■□□□ 1.73
COPE-206ENST00000597026 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
COPE-206ENST00000597026 LRRC9Q6ZRR7 1453 aa25.83■■□□□ 1.73
COPE-206ENST00000597026 ZNF777Q9ULD5 760 aaPredicted RBP25.82■■□□□ 1.72
COPE-206ENST00000597026 MBD5Q9P267 1494 aa25.81■■□□□ 1.72
COPE-206ENST00000597026 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
COPE-206ENST00000597026 ADGBQ8N7X0 1667 aa25.8■■□□□ 1.72
COPE-206ENST00000597026 MLECQ14165 292 aa25.8■■□□□ 1.72
COPE-206ENST00000597026 CFDP1Q9UEE9 299 aaPredicted RBP25.8■■□□□ 1.72
COPE-206ENST00000597026 C3P01024 1663 aa25.8■■□□□ 1.72
COPE-206ENST00000597026 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
COPE-206ENST00000597026 PREX1Q8TCU6 1659 aa25.77■■□□□ 1.72
COPE-206ENST00000597026 HNRNPMP52272 730 aaKnown RBP eCLIP25.77■■□□□ 1.72
COPE-206ENST00000597026 ZNF644Q9H582 1327 aaPredicted RBP25.77■■□□□ 1.72
COPE-206ENST00000597026 MROH2AA6NES4 1674 aa25.72■■□□□ 1.71
COPE-206ENST00000597026 SPAG9O60271 1321 aaKnown RBP25.71■■□□□ 1.71
COPE-206ENST00000597026 ARHGEF5Q12774 1597 aa25.7■■□□□ 1.71
COPE-206ENST00000597026 MYT1LQ9UL68 1186 aa25.7■■□□□ 1.7
COPE-206ENST00000597026 CCDC141Q6ZP82 1450 aa25.69■■□□□ 1.7
COPE-206ENST00000597026 A2MP01023 1474 aa25.68■■□□□ 1.7
COPE-206ENST00000597026 CLTCQ00610 1675 aaKnown RBP25.67■■□□□ 1.7
COPE-206ENST00000597026 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
COPE-206ENST00000597026 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
COPE-206ENST00000597026 RTEL1-TNFRSF6BF6WH68 1400 aa25.63■■□□□ 1.69
COPE-206ENST00000597026 MAST1Q9Y2H9 1570 aa25.61■■□□□ 1.69
COPE-206ENST00000597026 CEBPAP49715 358 aaPredicted RBP25.6■■□□□ 1.69
COPE-206ENST00000597026 CROCC2H7BZ55 1655 aa25.6■■□□□ 1.69
COPE-206ENST00000597026 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
COPE-206ENST00000597026 SETD1BQ9UPS6 1966 aaKnown RBP25.58■■□□□ 1.69
COPE-206ENST00000597026 CNTLNQ9NXG0 1405 aa25.57■■□□□ 1.68
COPE-206ENST00000597026 STRCQ7RTU9 1775 aa25.56■■□□□ 1.68
COPE-206ENST00000597026 HSPA2P54652 639 aa25.55■■□□□ 1.68
COPE-206ENST00000597026 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
COPE-206ENST00000597026 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
COPE-206ENST00000597026 MYO3AQ8NEV4 1616 aa25.52■■□□□ 1.68
COPE-206ENST00000597026 ZNF142P52746 1687 aaPredicted RBP25.51■■□□□ 1.67
COPE-206ENST00000597026 RNF17Q9BXT8 1623 aaKnown RBP25.49■■□□□ 1.67
COPE-206ENST00000597026 UHRF1BP1Q6BDS2 1440 aa25.49■■□□□ 1.67
COPE-206ENST00000597026 DHX29Q7Z478 1369 aaKnown RBP25.48■■□□□ 1.67
COPE-206ENST00000597026 DNMT1P26358 1616 aaKnown RBP25.46■■□□□ 1.67
COPE-206ENST00000597026 EIF2AK4Q9P2K8 1649 aaKnown RBP25.46■■□□□ 1.67
COPE-206ENST00000597026 NPATQ14207 1427 aa25.46■■□□□ 1.67
COPE-206ENST00000597026 MROH1Q8NDA8 1641 aa25.45■■□□□ 1.67
COPE-206ENST00000597026 FAM135AQ9P2D6 1515 aa25.45■■□□□ 1.66
COPE-206ENST00000597026 KDM5DQ9BY66 1539 aa25.44■■□□□ 1.66
COPE-206ENST00000597026 TCOF1Q13428 1488 aaKnown RBP25.43■■□□□ 1.66
COPE-206ENST00000597026 ZMYM3Q14202 1370 aa25.43■■□□□ 1.66
COPE-206ENST00000597026 SHANK2Q9UPX8 1470 aa25.42■■□□□ 1.66
COPE-206ENST00000597026 PTPRKQ15262 1439 aa25.42■■□□□ 1.66
COPE-206ENST00000597026 FGD6Q6ZV73 1430 aa25.42■■□□□ 1.66
COPE-206ENST00000597026 RSPH4AQ5TD94 716 aa25.41■■□□□ 1.66
COPE-206ENST00000597026 ESF1Q9H501 851 aaKnown RBP25.4■■□□□ 1.66
COPE-206ENST00000597026 ZC3H13Q5T200 1668 aaKnown RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms