RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
VMP1-215ENST00000592619 SEMA3EO15041 775 aa13.2□□□□□ -0.3
VMP1-215ENST00000592619 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
VMP1-215ENST00000592619 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
VMP1-215ENST00000592619 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
VMP1-215ENST00000592619 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
VMP1-215ENST00000592619 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
VMP1-215ENST00000592619 C7P10643 843 aa13.16□□□□□ -0.3
VMP1-215ENST00000592619 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
VMP1-215ENST00000592619 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
VMP1-215ENST00000592619 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
VMP1-215ENST00000592619 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
VMP1-215ENST00000592619 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
VMP1-215ENST00000592619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.317e-10■■□□□ 12
VMP1-215ENST00000592619 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
VMP1-215ENST00000592619 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
VMP1-215ENST00000592619 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
VMP1-215ENST00000592619 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
VMP1-215ENST00000592619 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
VMP1-215ENST00000592619 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
VMP1-215ENST00000592619 ZMYND10O75800 440 aa13.02□□□□□ -0.33
VMP1-215ENST00000592619 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
VMP1-215ENST00000592619 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
VMP1-215ENST00000592619 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
VMP1-215ENST00000592619 DPY19L2Q6NUT2 758 aa12.99□□□□□ -0.33
VMP1-215ENST00000592619 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
VMP1-215ENST00000592619 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
VMP1-215ENST00000592619 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
VMP1-215ENST00000592619 FOXK1P85037 733 aa12.96□□□□□ -0.33
VMP1-215ENST00000592619 DSG2Q14126 1118 aa12.96□□□□□ -0.33
VMP1-215ENST00000592619 POTEFA5A3E0 1075 aa12.95□□□□□ -0.34
VMP1-215ENST00000592619 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
VMP1-215ENST00000592619 IER5LQ5T953 404 aa12.95□□□□□ -0.34
VMP1-215ENST00000592619 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
VMP1-215ENST00000592619 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
VMP1-215ENST00000592619 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
VMP1-215ENST00000592619 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
VMP1-215ENST00000592619 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
VMP1-215ENST00000592619 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
VMP1-215ENST00000592619 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
VMP1-215ENST00000592619 PDIA6Q15084 440 aa12.93□□□□□ -0.34
VMP1-215ENST00000592619 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
VMP1-215ENST00000592619 DPYSL4O14531 572 aa12.91□□□□□ -0.34
VMP1-215ENST00000592619 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
VMP1-215ENST00000592619 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
VMP1-215ENST00000592619 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
VMP1-215ENST00000592619 KIF3CO14782 793 aa12.88□□□□□ -0.35
VMP1-215ENST00000592619 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
VMP1-215ENST00000592619 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
VMP1-215ENST00000592619 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
VMP1-215ENST00000592619 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
VMP1-215ENST00000592619 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
VMP1-215ENST00000592619 G3V3G9 751 aa12.84□□□□□ -0.35
VMP1-215ENST00000592619 AK7Q96M32 723 aa12.83□□□□□ -0.36
VMP1-215ENST00000592619 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
VMP1-215ENST00000592619 PLCG2P16885 1265 aa12.81□□□□□ -0.36
VMP1-215ENST00000592619 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
VMP1-215ENST00000592619 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
VMP1-215ENST00000592619 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
VMP1-215ENST00000592619 SEC24BO95487 1268 aa12.74□□□□□ -0.37
VMP1-215ENST00000592619 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
VMP1-215ENST00000592619 GPR37O15354 613 aa12.72□□□□□ -0.37
VMP1-215ENST00000592619 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
VMP1-215ENST00000592619 PTGER2P43116 358 aa12.71□□□□□ -0.37
VMP1-215ENST00000592619 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
VMP1-215ENST00000592619 TRIM66O15016 1216 aa12.69□□□□□ -0.38
VMP1-215ENST00000592619 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
VMP1-215ENST00000592619 ST18O60284 1047 aa12.68□□□□□ -0.38
VMP1-215ENST00000592619 OSBPP22059 807 aa12.66□□□□□ -0.38
VMP1-215ENST00000592619 TBC1D12O60347 775 aa12.65□□□□□ -0.38
VMP1-215ENST00000592619 PDE4DQ08499 809 aa12.65□□□□□ -0.38
VMP1-215ENST00000592619 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
VMP1-215ENST00000592619 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
VMP1-215ENST00000592619 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
VMP1-215ENST00000592619 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
VMP1-215ENST00000592619 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
VMP1-215ENST00000592619 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
VMP1-215ENST00000592619 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
VMP1-215ENST00000592619 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
VMP1-215ENST00000592619 PTCD2Q8WV60 388 aaKnown RBP12.61□□□□□ -0.39
VMP1-215ENST00000592619 MMRN1Q13201 1228 aa12.6□□□□□ -0.39
VMP1-215ENST00000592619 EVI5O60447 810 aa12.59□□□□□ -0.39
VMP1-215ENST00000592619 HIC1Q14526 733 aa12.59□□□□□ -0.39
VMP1-215ENST00000592619 IRF6O14896 467 aa12.58□□□□□ -0.4
VMP1-215ENST00000592619 GNPATO15228 680 aa12.58□□□□□ -0.4
VMP1-215ENST00000592619 FCHSD2O94868 740 aa12.58□□□□□ -0.4
VMP1-215ENST00000592619 SLC34A2O95436 690 aa12.58□□□□□ -0.4
VMP1-215ENST00000592619 SPNS2Q8IVW8 549 aa12.58□□□□□ -0.4
VMP1-215ENST00000592619 DDX12PQ92771 950 aa12.58□□□□□ -0.4
VMP1-215ENST00000592619 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
VMP1-215ENST00000592619 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
VMP1-215ENST00000592619 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
VMP1-215ENST00000592619 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
VMP1-215ENST00000592619 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
VMP1-215ENST00000592619 AMHR2Q16671 573 aa12.53□□□□□ -0.4
VMP1-215ENST00000592619 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
VMP1-215ENST00000592619 PTGDRQ13258 359 aa12.51□□□□□ -0.41
VMP1-215ENST00000592619 FECHP22830 423 aa12.48□□□□□ -0.41
VMP1-215ENST00000592619 EPAS1Q99814 870 aa12.47□□□□□ -0.41
VMP1-215ENST00000592619 PHF14O94880 888 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms