RNA–Protein interactions for RNA: ENST00000590187.2

NCAN-204, Transcript of neurocan, humanhuman

TSL 1 (best)

Gene NCAN, Length 2,361 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-204ENST00000590187 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
NCAN-204ENST00000590187 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
NCAN-204ENST00000590187 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
NCAN-204ENST00000590187 EFCAB2Q5VUJ9 269 aa24.08■■□□□ 1.45
NCAN-204ENST00000590187 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.45
NCAN-204ENST00000590187 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
NCAN-204ENST00000590187 CDC42BPBQ9Y5S2 1711 aa24.07■■□□□ 1.44
NCAN-204ENST00000590187 SUPT6HQ7KZ85 1726 aaKnown RBP24.05■■□□□ 1.44
NCAN-204ENST00000590187 ADGRL1O94910 1474 aa24.05■■□□□ 1.44
NCAN-204ENST00000590187 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
NCAN-204ENST00000590187 RAPGEF3O95398 923 aa24.04■■□□□ 1.44
NCAN-204ENST00000590187 MAP3K1Q13233 1512 aa24.04■■□□□ 1.44
NCAN-204ENST00000590187 LRRC9Q6ZRR7 1453 aa24.03■■□□□ 1.44
NCAN-204ENST00000590187 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
NCAN-204ENST00000590187 SCAPERQ9BY12 1400 aa24■■□□□ 1.43
NCAN-204ENST00000590187 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
NCAN-204ENST00000590187 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
NCAN-204ENST00000590187 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
NCAN-204ENST00000590187 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
NCAN-204ENST00000590187 NCOA2Q15596 1464 aa23.99■■□□□ 1.43
NCAN-204ENST00000590187 KANK4Q5T7N3 995 aaPredicted RBP23.99■■□□□ 1.43
NCAN-204ENST00000590187 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
NCAN-204ENST00000590187 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
NCAN-204ENST00000590187 CFDP1Q9UEE9 299 aaPredicted RBP23.96■■□□□ 1.43
NCAN-204ENST00000590187 POGZQ7Z3K3 1410 aa23.93■■□□□ 1.42
NCAN-204ENST00000590187 ABCC1P33527 1531 aa23.92■■□□□ 1.42
NCAN-204ENST00000590187 SAMD9LQ8IVG5 1584 aa23.92■■□□□ 1.42
NCAN-204ENST00000590187 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
NCAN-204ENST00000590187 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
NCAN-204ENST00000590187 ZNF518AQ6AHZ1 1483 aa23.88■■□□□ 1.41
NCAN-204ENST00000590187 ZMYM4Q5VZL5 1548 aa23.87■■□□□ 1.41
NCAN-204ENST00000590187 SYCP2Q9BX26 1530 aa23.87■■□□□ 1.41
NCAN-204ENST00000590187 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
NCAN-204ENST00000590187 GTF3C3Q9Y5Q9 886 aa23.86■■□□□ 1.41
NCAN-204ENST00000590187 ARHGEF12Q9NZN5 1544 aa23.86■■□□□ 1.41
NCAN-204ENST00000590187 PLEKHH2Q8IVE3 1493 aa23.84■■□□□ 1.41
NCAN-204ENST00000590187 ZFYVE16Q7Z3T8 1539 aa23.84■■□□□ 1.41
NCAN-204ENST00000590187 HNRNPMP52272 730 aaKnown RBP eCLIP23.84■■□□□ 1.41
NCAN-204ENST00000590187 TRAPPC8Q9Y2L5 1435 aa23.83■■□□□ 1.41
NCAN-204ENST00000590187 ARHGEF40Q8TER5 1519 aa23.83■■□□□ 1.41
NCAN-204ENST00000590187 ZNF644Q9H582 1327 aaPredicted RBP23.83■■□□□ 1.41
NCAN-204ENST00000590187 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.4
NCAN-204ENST00000590187 KDM5CP41229 1560 aa23.81■■□□□ 1.4
NCAN-204ENST00000590187 MAGI2Q86UL8 1455 aa23.81■■□□□ 1.4
NCAN-204ENST00000590187 YEATS2Q9ULM3 1422 aa23.8■■□□□ 1.4
NCAN-204ENST00000590187 HECW2Q9P2P5 1572 aa23.8■■□□□ 1.4
NCAN-204ENST00000590187 BCL11AQ9H165 835 aa23.79■■□□□ 1.4
NCAN-204ENST00000590187 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
NCAN-204ENST00000590187 MYOM3Q5VTT5 1437 aa23.79■■□□□ 1.4
NCAN-204ENST00000590187 KIAA1107Q9UPP5 1409 aa23.79■■□□□ 1.4
NCAN-204ENST00000590187 ARID4BQ4LE39 1312 aaPredicted RBP23.76■■□□□ 1.39
NCAN-204ENST00000590187 SPAG9O60271 1321 aaKnown RBP23.73■■□□□ 1.39
NCAN-204ENST00000590187 MIA2Q96PC5 1412 aa23.72■■□□□ 1.39
NCAN-204ENST00000590187 MLH3Q9UHC1 1453 aa23.72■■□□□ 1.39
NCAN-204ENST00000590187 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
NCAN-204ENST00000590187 ATP10AO60312 1499 aa23.7■■□□□ 1.39
NCAN-204ENST00000590187 ABCA6Q8N139 1617 aa23.7■■□□□ 1.38
NCAN-204ENST00000590187 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
NCAN-204ENST00000590187 MBD5Q9P267 1494 aa23.69■■□□□ 1.38
NCAN-204ENST00000590187 DIP2CQ9Y2E4 1556 aa23.69■■□□□ 1.38
NCAN-204ENST00000590187 KDM4FA0A1W2PPD8 638 aa23.69■■□□□ 1.38
NCAN-204ENST00000590187 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
NCAN-204ENST00000590187 C9orf84Q5VXU9 1444 aa23.69■■□□□ 1.38
NCAN-204ENST00000590187 PTPN23Q9H3S7 1636 aa23.68■■□□□ 1.38
NCAN-204ENST00000590187 ATP7AQ04656 1500 aa23.68■■□□□ 1.38
NCAN-204ENST00000590187 CCDC141Q6ZP82 1450 aa23.68■■□□□ 1.38
NCAN-204ENST00000590187 FGD6Q6ZV73 1430 aa23.66■■□□□ 1.38
NCAN-204ENST00000590187 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
NCAN-204ENST00000590187 SIGLEC1Q9BZZ2 1709 aa23.65■■□□□ 1.38
NCAN-204ENST00000590187 ARHGEF5Q12774 1597 aa23.65■■□□□ 1.38
NCAN-204ENST00000590187 RSPH4AQ5TD94 716 aa23.63■■□□□ 1.37
NCAN-204ENST00000590187 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
NCAN-204ENST00000590187 MLECQ14165 292 aa23.62■■□□□ 1.37
NCAN-204ENST00000590187 TSPY4P0CV99 314 aa23.6■■□□□ 1.37
NCAN-204ENST00000590187 TSPY10P0CW01 314 aa23.6■■□□□ 1.37
NCAN-204ENST00000590187 PRKCSHP14314 528 aaPredicted RBP23.58■■□□□ 1.37
NCAN-204ENST00000590187 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.37
NCAN-204ENST00000590187 REREQ9P2R6 1566 aa23.58■■□□□ 1.37
NCAN-204ENST00000590187 TCOF1Q13428 1488 aaKnown RBP23.58■■□□□ 1.37
NCAN-204ENST00000590187 RTEL1-TNFRSF6BF6WH68 1400 aa23.57■■□□□ 1.36
NCAN-204ENST00000590187 ADGBQ8N7X0 1667 aa23.57■■□□□ 1.36
NCAN-204ENST00000590187 ADAMTSL3P82987 1691 aa23.56■■□□□ 1.36
NCAN-204ENST00000590187 MADDQ8WXG6 1647 aa23.55■■□□□ 1.36
NCAN-204ENST00000590187 A2MP01023 1474 aa23.54■■□□□ 1.36
NCAN-204ENST00000590187 CROCC2H7BZ55 1655 aa23.53■■□□□ 1.36
NCAN-204ENST00000590187 DNMT1P26358 1616 aaKnown RBP23.52■■□□□ 1.36
NCAN-204ENST00000590187 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.35
NCAN-204ENST00000590187 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
NCAN-204ENST00000590187 DAPK1P53355 1430 aa23.51■■□□□ 1.35
NCAN-204ENST00000590187 FER1L4A9Z1Z3 1794 aa23.5■■□□□ 1.35
NCAN-204ENST00000590187 ABCC5O15440 1437 aa23.5■■□□□ 1.35
NCAN-204ENST00000590187 AGLP35573 1532 aa23.5■■□□□ 1.35
NCAN-204ENST00000590187 PLXNC1O60486 1568 aa23.49■■□□□ 1.35
NCAN-204ENST00000590187 SHANK2Q9UPX8 1470 aa23.46■■□□□ 1.35
NCAN-204ENST00000590187 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
NCAN-204ENST00000590187 CHIC2Q9UKJ5 165 aa23.45■■□□□ 1.34
NCAN-204ENST00000590187 DHX29Q7Z478 1369 aaKnown RBP23.44■■□□□ 1.34
NCAN-204ENST00000590187 PTPRMP28827 1452 aa23.44■■□□□ 1.34
NCAN-204ENST00000590187 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
NCAN-204ENST00000590187 GGT6Q6P531 493 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms