RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 PDE4AP27815 886 aa9.05□□□□□ -0.96
HMGN1P30-201ENST00000589286 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
HMGN1P30-201ENST00000589286 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
HMGN1P30-201ENST00000589286 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
HMGN1P30-201ENST00000589286 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
HMGN1P30-201ENST00000589286 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
HMGN1P30-201ENST00000589286 LARP6Q9BRS8 491 aaKnown RBP9.01□□□□□ -0.97
HMGN1P30-201ENST00000589286 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
HMGN1P30-201ENST00000589286 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
HMGN1P30-201ENST00000589286 C2orf72A6NCS6 295 aa9□□□□□ -0.97
HMGN1P30-201ENST00000589286 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
HMGN1P30-201ENST00000589286 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
HMGN1P30-201ENST00000589286 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
HMGN1P30-201ENST00000589286 OTUD5Q96G74 571 aa8.98□□□□□ -0.97
HMGN1P30-201ENST00000589286 KIF3CO14782 793 aa8.97□□□□□ -0.97
HMGN1P30-201ENST00000589286 FOXK1P85037 733 aa8.96□□□□□ -0.98
HMGN1P30-201ENST00000589286 PPP1R15BQ5SWA1 713 aa8.95□□□□□ -0.98
HMGN1P30-201ENST00000589286 DSG2Q14126 1118 aa8.94□□□□□ -0.98
HMGN1P30-201ENST00000589286 MFSD10Q14728 455 aa8.94□□□□□ -0.98
HMGN1P30-201ENST00000589286 SNPHO15079 494 aa8.93□□□□□ -0.98
HMGN1P30-201ENST00000589286 PLPP6Q8IY26 295 aa8.93□□□□□ -0.98
HMGN1P30-201ENST00000589286 KDM2AQ9Y2K7 1162 aa8.91□□□□□ -0.98
HMGN1P30-201ENST00000589286 RIMBP2O15034 1052 aa8.89□□□□□ -0.99
HMGN1P30-201ENST00000589286 E2F4Q16254 413 aa8.89□□□□□ -0.99
HMGN1P30-201ENST00000589286 DOK7Q18PE1 504 aa8.89□□□□□ -0.99
HMGN1P30-201ENST00000589286 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
HMGN1P30-201ENST00000589286 ZNF710Q8N1W2 664 aa8.86□□□□□ -0.99
HMGN1P30-201ENST00000589286 TBC1D12O60347 775 aa8.84□□□□□ -0.99
HMGN1P30-201ENST00000589286 SLC34A2O95436 690 aa8.84□□□□□ -0.99
HMGN1P30-201ENST00000589286 CAMK2BQ13554 666 aa8.84□□□□□ -0.99
HMGN1P30-201ENST00000589286 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
HMGN1P30-201ENST00000589286 ZSWIM6Q9HCJ5 1215 aa8.82□□□□□ -1
HMGN1P30-201ENST00000589286 HOXB3P14651 431 aaPredicted RBP8.81□□□□□ -1
HMGN1P30-201ENST00000589286 MAP3K9P80192 1104 aa8.81□□□□□ -1
HMGN1P30-201ENST00000589286 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
HMGN1P30-201ENST00000589286 ZNF316A6NFI3 1004 aaPredicted RBP8.8□□□□□ -1
HMGN1P30-201ENST00000589286 EMILIN3Q9NT22 766 aa8.8□□□□□ -1
HMGN1P30-201ENST00000589286 KCNV2Q8TDN2 545 aa8.79□□□□□ -1
HMGN1P30-201ENST00000589286 OXER1Q8TDS5 423 aa8.79□□□□□ -1
HMGN1P30-201ENST00000589286 ARHGEF1Q92888 912 aaKnown RBP8.79□□□□□ -1
HMGN1P30-201ENST00000589286 PCDHGA4Q9Y5G9 962 aa8.78□□□□□ -1
HMGN1P30-201ENST00000589286 DPYSL4O14531 572 aa8.77□□□□□ -1.01
HMGN1P30-201ENST00000589286 FAM163AQ96GL9 167 aaPredicted RBP8.77□□□□□ -1.01
HMGN1P30-201ENST00000589286 ARIH1Q9Y4X5 557 aaPredicted RBP8.77□□□□□ -1.01
HMGN1P30-201ENST00000589286 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
HMGN1P30-201ENST00000589286 SPDYE16A6NNV3 312 aaPredicted RBP8.74□□□□□ -1.01
HMGN1P30-201ENST00000589286 ST18O60284 1047 aa8.73□□□□□ -1.01
HMGN1P30-201ENST00000589286 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P30-201ENST00000589286 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
HMGN1P30-201ENST00000589286 EVI5O60447 810 aa8.72□□□□□ -1.01
HMGN1P30-201ENST00000589286 NUDT7P0C024 238 aa8.72□□□□□ -1.01
HMGN1P30-201ENST00000589286 NBR1Q14596 966 aa8.72□□□□□ -1.01
HMGN1P30-201ENST00000589286 PDIA6Q15084 440 aa8.7□□□□□ -1.02
HMGN1P30-201ENST00000589286 KHSRPQ92945 711 aaKnown RBP eCLIP8.7□□□□□ -1.02
HMGN1P30-201ENST00000589286 EMP3P54852 163 aa8.68□□□□□ -1.02
HMGN1P30-201ENST00000589286 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
HMGN1P30-201ENST00000589286 PSDA5PKW4 1024 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P30-201ENST00000589286 ERBB3P21860 1342 aa8.65□□□□□ -1.02
HMGN1P30-201ENST00000589286 TULP1O00294 542 aaPredicted RBP8.65□□□□□ -1.02
HMGN1P30-201ENST00000589286 MARVELD3Q96A59 401 aa8.65□□□□□ -1.02
HMGN1P30-201ENST00000589286 BCANQ96GW7 911 aa8.65□□□□□ -1.02
HMGN1P30-201ENST00000589286 LHX6Q9UPM6 363 aa8.65□□□□□ -1.02
HMGN1P30-201ENST00000589286 KDM4FA0A1W2PPD8 638 aa8.64□□□□□ -1.03
HMGN1P30-201ENST00000589286 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
HMGN1P30-201ENST00000589286 SEMA3EO15041 775 aa8.63□□□□□ -1.03
HMGN1P30-201ENST00000589286 PTGER2P43116 358 aa8.63□□□□□ -1.03
HMGN1P30-201ENST00000589286 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
HMGN1P30-201ENST00000589286 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
HMGN1P30-201ENST00000589286 DDX12PQ92771 950 aa8.62□□□□□ -1.03
HMGN1P30-201ENST00000589286 FAM205CA6NFA0 338 aa8.61□□□□□ -1.03
HMGN1P30-201ENST00000589286 PHF14O94880 888 aa8.61□□□□□ -1.03
HMGN1P30-201ENST00000589286 PPP4R3BQ5MIZ7 849 aa8.61□□□□□ -1.03
HMGN1P30-201ENST00000589286 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
HMGN1P30-201ENST00000589286 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
HMGN1P30-201ENST00000589286 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
HMGN1P30-201ENST00000589286 EPAS1Q99814 870 aa8.6□□□□□ -1.03
HMGN1P30-201ENST00000589286 TESPA1A2RU30 521 aaPredicted RBP8.59□□□□□ -1.03
HMGN1P30-201ENST00000589286 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
HMGN1P30-201ENST00000589286 FOSBP53539 338 aa8.58□□□□□ -1.04
HMGN1P30-201ENST00000589286 TYW1BQ6NUM6 668 aa8.58□□□□□ -1.04
HMGN1P30-201ENST00000589286 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
HMGN1P30-201ENST00000589286 MLLT3P42568 568 aaPredicted RBP8.57□□□□□ -1.04
HMGN1P30-201ENST00000589286 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
HMGN1P30-201ENST00000589286 KCNH8Q96L42 1107 aa8.56□□□□□ -1.04
HMGN1P30-201ENST00000589286 HS3ST6Q96QI5 342 aa8.56□□□□□ -1.04
HMGN1P30-201ENST00000589286 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
HMGN1P30-201ENST00000589286 RBM33Q96EV2 1170 aaKnown RBP8.54□□□□□ -1.04
HMGN1P30-201ENST00000589286 POTEMA6NI47 508 aa8.53□□□□□ -1.04
HMGN1P30-201ENST00000589286 MAP3K7O43318 606 aa8.53□□□□□ -1.04
HMGN1P30-201ENST00000589286 OSBPP22059 807 aa8.53□□□□□ -1.04
HMGN1P30-201ENST00000589286 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
HMGN1P30-201ENST00000589286 ZNF687Q8N1G0 1237 aa8.52□□□□□ -1.05
HMGN1P30-201ENST00000589286 BCL2L12Q9HB09 334 aa8.52□□□□□ -1.05
HMGN1P30-201ENST00000589286 PBX2P40425 430 aa8.51□□□□□ -1.05
HMGN1P30-201ENST00000589286 ADAM33Q9BZ11 813 aa8.51□□□□□ -1.05
HMGN1P30-201ENST00000589286 PTPREP23469 700 aa8.5□□□□□ -1.05
HMGN1P30-201ENST00000589286 POTEB3A0JP26 581 aa8.48□□□□□ -1.05
HMGN1P30-201ENST00000589286 NUTM2FA1L443 756 aa8.48□□□□□ -1.05
HMGN1P30-201ENST00000589286 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
HMGN1P30-201ENST00000589286 C6orf132Q5T0Z8 1188 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms