RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 EFCAB2Q5VUJ9 269 aa33.74■■■□□ 2.99
NCLN-204ENST00000588428 ARHGAP5Q13017 1502 aa33.72■■■□□ 2.99
NCLN-204ENST00000588428 POGZQ7Z3K3 1410 aa33.71■■■□□ 2.99
NCLN-204ENST00000588428 SCAPERQ9BY12 1400 aa33.7■■■□□ 2.99
NCLN-204ENST00000588428 CDC42BPAQ5VT25 1732 aa33.7■■■□□ 2.99
NCLN-204ENST00000588428 MAGI2Q86UL8 1455 aa33.69■■■□□ 2.98
NCLN-204ENST00000588428 LOC105371045A0A1W2PR82 267 aa33.66■■■□□ 2.98
NCLN-204ENST00000588428 ZFYVE16Q7Z3T8 1539 aa33.63■■■□□ 2.97
NCLN-204ENST00000588428 KDM5CP41229 1560 aa33.6■■■□□ 2.97
NCLN-204ENST00000588428 ZNF518AQ6AHZ1 1483 aa33.59■■■□□ 2.97
NCLN-204ENST00000588428 EHBP1L1Q8N3D4 1523 aa33.58■■■□□ 2.97
NCLN-204ENST00000588428 ADAMTSL3P82987 1691 aa33.58■■■□□ 2.97
NCLN-204ENST00000588428 ABCC1P33527 1531 aa33.58■■■□□ 2.97
NCLN-204ENST00000588428 BCORL1Q5H9F3 1711 aa33.57■■■□□ 2.96
NCLN-204ENST00000588428 MTUS2Q5JR59 1369 aa33.57■■■□□ 2.96
NCLN-204ENST00000588428 ITSN2Q9NZM3 1697 aa33.55■■■□□ 2.96
NCLN-204ENST00000588428 VPS8Q8N3P4 1428 aa33.55■■■□□ 2.96
NCLN-204ENST00000588428 YEATS2Q9ULM3 1422 aa33.54■■■□□ 2.96
NCLN-204ENST00000588428 GPATCH8Q9UKJ3 1502 aaKnown RBP33.54■■■□□ 2.96
NCLN-204ENST00000588428 HECW2Q9P2P5 1572 aa33.48■■■□□ 2.95
NCLN-204ENST00000588428 ARHGEF12Q9NZN5 1544 aa33.48■■■□□ 2.95
NCLN-204ENST00000588428 SIGLEC1Q9BZZ2 1709 aa33.48■■■□□ 2.95
NCLN-204ENST00000588428 TIAM1Q13009 1591 aa33.47■■■□□ 2.95
NCLN-204ENST00000588428 SAMD9LQ8IVG5 1584 aa33.47■■■□□ 2.95
NCLN-204ENST00000588428 ATP10AO60312 1499 aa33.44■■■□□ 2.94
NCLN-204ENST00000588428 CCNB3Q8WWL7 1395 aa33.44■■■□□ 2.94
NCLN-204ENST00000588428 MLH3Q9UHC1 1453 aa33.44■■■□□ 2.94
NCLN-204ENST00000588428 AFAP1Q8N556 730 aa33.42■■■□□ 2.94
NCLN-204ENST00000588428 C9orf84Q5VXU9 1444 aa33.42■■■□□ 2.94
NCLN-204ENST00000588428 ARID4BQ4LE39 1312 aaPredicted RBP33.41■■■□□ 2.94
NCLN-204ENST00000588428 TRAPPC8Q9Y2L5 1435 aa33.41■■■□□ 2.94
NCLN-204ENST00000588428 MADDQ8WXG6 1647 aa33.41■■■□□ 2.94
NCLN-204ENST00000588428 SUPT6HQ7KZ85 1726 aaKnown RBP33.41■■■□□ 2.94
NCLN-204ENST00000588428 MAP3K1Q13233 1512 aa33.4■■■□□ 2.94
NCLN-204ENST00000588428 REREQ9P2R6 1566 aa33.39■■■□□ 2.94
NCLN-204ENST00000588428 PLEKHH2Q8IVE3 1493 aa33.39■■■□□ 2.94
NCLN-204ENST00000588428 DIP2CQ9Y2E4 1556 aa33.38■■■□□ 2.93
NCLN-204ENST00000588428 KIAA1107Q9UPP5 1409 aa33.38■■■□□ 2.93
NCLN-204ENST00000588428 SYCP2Q9BX26 1530 aa33.37■■■□□ 2.93
NCLN-204ENST00000588428 PTPRMP28827 1452 aa33.36■■■□□ 2.93
NCLN-204ENST00000588428 ABCA6Q8N139 1617 aa33.35■■■□□ 2.93
NCLN-204ENST00000588428 CFDP1Q9UEE9 299 aaPredicted RBP33.35■■■□□ 2.93
NCLN-204ENST00000588428 KIDINS220Q9ULH0 1771 aa33.34■■■□□ 2.93
NCLN-204ENST00000588428 NCOA2Q15596 1464 aa33.31■■■□□ 2.92
NCLN-204ENST00000588428 LRRC9Q6ZRR7 1453 aa33.31■■■□□ 2.92
NCLN-204ENST00000588428 ZNF777Q9ULD5 760 aaPredicted RBP33.3■■■□□ 2.92
NCLN-204ENST00000588428 RIMS1Q86UR5 1692 aaKnown RBP33.29■■■□□ 2.92
NCLN-204ENST00000588428 FER1L4A9Z1Z3 1794 aa33.27■■■□□ 2.92
NCLN-204ENST00000588428 AGLP35573 1532 aa33.24■■■□□ 2.91
NCLN-204ENST00000588428 INO80Q9ULG1 1556 aaPredicted RBP33.23■■■□□ 2.91
NCLN-204ENST00000588428 HNRNPMP52272 730 aaKnown RBP eCLIP33.21■■■□□ 2.917e-10■■■□□ 18.3
NCLN-204ENST00000588428 MYT1LQ9UL68 1186 aa33.2■■■□□ 2.91
NCLN-204ENST00000588428 MBD5Q9P267 1494 aa33.19■■■□□ 2.9
NCLN-204ENST00000588428 ATP7AQ04656 1500 aa33.19■■■□□ 2.9
NCLN-204ENST00000588428 SPAG9O60271 1321 aaKnown RBP33.17■■■□□ 2.9
NCLN-204ENST00000588428 ZNF644Q9H582 1327 aaPredicted RBP33.14■■■□□ 2.9
NCLN-204ENST00000588428 CAMSAP2Q08AD1 1489 aa33.13■■■□□ 2.89
NCLN-204ENST00000588428 MLECQ14165 292 aa33.11■■■□□ 2.89
NCLN-204ENST00000588428 KANK4Q5T7N3 995 aaPredicted RBP33.11■■■□□ 2.89
NCLN-204ENST00000588428 PLXNC1O60486 1568 aa33.1■■■□□ 2.89
NCLN-204ENST00000588428 ADGBQ8N7X0 1667 aa33.09■■■□□ 2.89
NCLN-204ENST00000588428 RTEL1-TNFRSF6BF6WH68 1400 aa33.08■■■□□ 2.89
NCLN-204ENST00000588428 ARHGEF5Q12774 1597 aa33.07■■■□□ 2.88
NCLN-204ENST00000588428 CCDC141Q6ZP82 1450 aa33.06■■■□□ 2.88
NCLN-204ENST00000588428 RSPH4AQ5TD94 716 aa33.05■■■□□ 2.88
NCLN-204ENST00000588428 A2MP01023 1474 aa33.03■■■□□ 2.88
NCLN-204ENST00000588428 MYOM3Q5VTT5 1437 aa33.02■■■□□ 2.88
NCLN-204ENST00000588428 MIA2Q96PC5 1412 aa33.02■■■□□ 2.88
NCLN-204ENST00000588428 APLP2Q06481 763 aa33.01■■■□□ 2.87
NCLN-204ENST00000588428 LMTK3Q96Q04 1460 aa32.99■■■□□ 2.87
NCLN-204ENST00000588428 CNTLNQ9NXG0 1405 aa32.94■■■□□ 2.86
NCLN-204ENST00000588428 SETD1BQ9UPS6 1966 aaKnown RBP32.94■■■□□ 2.86
NCLN-204ENST00000588428 MROH2AA6NES4 1674 aa32.94■■■□□ 2.86
NCLN-204ENST00000588428 C3P01024 1663 aa32.93■■■□□ 2.86
NCLN-204ENST00000588428 MAST1Q9Y2H9 1570 aa32.92■■■□□ 2.86
NCLN-204ENST00000588428 PREX1Q8TCU6 1659 aa32.91■■■□□ 2.86
NCLN-204ENST00000588428 DHX29Q7Z478 1369 aaKnown RBP32.87■■■□□ 2.85
NCLN-204ENST00000588428 PTPN23Q9H3S7 1636 aa32.84■■■□□ 2.85
NCLN-204ENST00000588428 ESF1Q9H501 851 aaKnown RBP32.84■■■□□ 2.85
NCLN-204ENST00000588428 TSPY4P0CV99 314 aa32.83■■■□□ 2.85
NCLN-204ENST00000588428 TSPY10P0CW01 314 aa32.83■■■□□ 2.85
NCLN-204ENST00000588428 PLPPR3Q6T4P5 718 aa32.83■■■□□ 2.85
NCLN-204ENST00000588428 CEBPAP49715 358 aaPredicted RBP32.82■■■□□ 2.84
NCLN-204ENST00000588428 PPP6R1Q9UPN7 881 aa32.81■■■□□ 2.84
NCLN-204ENST00000588428 CLTCQ00610 1675 aaKnown RBP32.8■■■□□ 2.84
NCLN-204ENST00000588428 CROCC2H7BZ55 1655 aa32.79■■■□□ 2.84
NCLN-204ENST00000588428 TCOF1Q13428 1488 aaKnown RBP32.79■■■□□ 2.84
NCLN-204ENST00000588428 FGD6Q6ZV73 1430 aa32.78■■■□□ 2.84
NCLN-204ENST00000588428 FAM135AQ9P2D6 1515 aa32.77■■■□□ 2.84
NCLN-204ENST00000588428 SHANK2Q9UPX8 1470 aa32.75■■■□□ 2.83
NCLN-204ENST00000588428 NPATQ14207 1427 aa32.73■■■□□ 2.83
NCLN-204ENST00000588428 DNMT1P26358 1616 aaKnown RBP32.73■■■□□ 2.83
NCLN-204ENST00000588428 ZMYM3Q14202 1370 aa32.72■■■□□ 2.83
NCLN-204ENST00000588428 UHRF1BP1Q6BDS2 1440 aa32.72■■■□□ 2.83
NCLN-204ENST00000588428 EIF2AK4Q9P2K8 1649 aaKnown RBP32.71■■■□□ 2.83
NCLN-204ENST00000588428 GGT6Q6P531 493 aa32.71■■■□□ 2.83
NCLN-204ENST00000588428 ABCC5O15440 1437 aa32.68■■■□□ 2.82
NCLN-204ENST00000588428 RNF17Q9BXT8 1623 aaKnown RBP32.68■■■□□ 2.82
NCLN-204ENST00000588428 KIF3BO15066 747 aa32.66■■■□□ 2.82
NCLN-204ENST00000588428 HSPA2P54652 639 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms