RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 SMYD5Q6GMV2 418 aa7.38□□□□□ -1.23
SPIRE1-212ENST00000588236 TMC2Q8TDI7 906 aa7.38□□□□□ -1.23
SPIRE1-212ENST00000588236 TMEM121BQ9BXQ6 578 aaPredicted RBP7.38□□□□□ -1.23
SPIRE1-212ENST00000588236 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
SPIRE1-212ENST00000588236 NCKAP5LQ9HCH0 1330 aa7.37□□□□□ -1.23
SPIRE1-212ENST00000588236 MICALL2Q8IY33 904 aa7.37□□□□□ -1.23
SPIRE1-212ENST00000588236 PDCD7Q8N8D1 485 aaKnown RBP7.37□□□□□ -1.23
SPIRE1-212ENST00000588236 KCNV2Q8TDN2 545 aa7.37□□□□□ -1.23
SPIRE1-212ENST00000588236 CAMK2BQ13554 666 aa7.35□□□□□ -1.23
SPIRE1-212ENST00000588236 FOXK1P85037 733 aa7.33□□□□□ -1.24
SPIRE1-212ENST00000588236 PPP1R15BQ5SWA1 713 aa7.33□□□□□ -1.24
SPIRE1-212ENST00000588236 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
SPIRE1-212ENST00000588236 SPDYE16A6NNV3 312 aaPredicted RBP7.31□□□□□ -1.24
SPIRE1-212ENST00000588236 DPY19L2Q6NUT2 758 aa7.31□□□□□ -1.24
SPIRE1-212ENST00000588236 TESPA1A2RU30 521 aaPredicted RBP7.27□□□□□ -1.25
SPIRE1-212ENST00000588236 C3orf67Q6ZVT6 689 aa7.27□□□□□ -1.25
SPIRE1-212ENST00000588236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.27□□□□□ -1.25
SPIRE1-212ENST00000588236 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
SPIRE1-212ENST00000588236 KIF3CO14782 793 aa7.26□□□□□ -1.25
SPIRE1-212ENST00000588236 DSG2Q14126 1118 aa7.26□□□□□ -1.25
SPIRE1-212ENST00000588236 TBC1D12O60347 775 aa7.25□□□□□ -1.25
SPIRE1-212ENST00000588236 PLPP6Q8IY26 295 aa7.25□□□□□ -1.25
SPIRE1-212ENST00000588236 PELP1Q8IZL8 1130 aaKnown RBP7.25□□□□□ -1.25
SPIRE1-212ENST00000588236 PLSCR2Q9NRY7 297 aa7.25□□□□□ -1.25
SPIRE1-212ENST00000588236 C2orf72A6NCS6 295 aa7.24□□□□□ -1.25
SPIRE1-212ENST00000588236 ZNF316A6NFI3 1004 aaPredicted RBP7.24□□□□□ -1.25
SPIRE1-212ENST00000588236 LMOD2Q6P5Q4 547 aa7.24□□□□□ -1.25
SPIRE1-212ENST00000588236 MAP3K9P80192 1104 aa7.23□□□□□ -1.25
SPIRE1-212ENST00000588236 COLQQ9Y215 455 aaPredicted RBP7.23□□□□□ -1.25
SPIRE1-212ENST00000588236 PDIA6Q15084 440 aa7.22□□□□□ -1.25
SPIRE1-212ENST00000588236 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.22□□□□□ -1.25
SPIRE1-212ENST00000588236 SEMA3EO15041 775 aa7.21□□□□□ -1.26
SPIRE1-212ENST00000588236 PRKCSHP14314 528 aaPredicted RBP7.21□□□□□ -1.26
SPIRE1-212ENST00000588236 SLC34A2O95436 690 aa7.2□□□□□ -1.26
SPIRE1-212ENST00000588236 MAMSTRQ6ZN01 415 aa7.19□□□□□ -1.26
SPIRE1-212ENST00000588236 DPYSL4O14531 572 aa7.18□□□□□ -1.26
SPIRE1-212ENST00000588236 POTEIP0CG38 1075 aa7.18□□□□□ -1.26
SPIRE1-212ENST00000588236 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
SPIRE1-212ENST00000588236 POTEFA5A3E0 1075 aa7.17□□□□□ -1.26
SPIRE1-212ENST00000588236 PTGER2P43116 358 aa7.17□□□□□ -1.26
SPIRE1-212ENST00000588236 OXER1Q8TDS5 423 aa7.17□□□□□ -1.26
SPIRE1-212ENST00000588236 PTCD2Q8WV60 388 aaKnown RBP7.17□□□□□ -1.26
SPIRE1-212ENST00000588236 DAXXQ9UER7 740 aaPredicted RBP7.15□□□□□ -1.26
SPIRE1-212ENST00000588236 TMEM92Q6UXU6 159 aa7.13□□□□□ -1.27
SPIRE1-212ENST00000588236 ZC3H15Q8WU90 426 aaKnown RBP7.13□□□□□ -1.27
SPIRE1-212ENST00000588236 RIMBP2O15034 1052 aa7.12□□□□□ -1.27
SPIRE1-212ENST00000588236 GPIHBP1Q8IV16 184 aa7.12□□□□□ -1.27
SPIRE1-212ENST00000588236 SCUBE2Q9NQ36 999 aa7.12□□□□□ -1.27
SPIRE1-212ENST00000588236 DOK7Q18PE1 504 aa7.11□□□□□ -1.27
SPIRE1-212ENST00000588236 ANO8Q9HCE9 1232 aaPredicted RBP7.11□□□□□ -1.27
SPIRE1-212ENST00000588236 ZSWIM6Q9HCJ5 1215 aa7.11□□□□□ -1.27
SPIRE1-212ENST00000588236 EVI5O60447 810 aa7.1□□□□□ -1.27
SPIRE1-212ENST00000588236 ZMYND10O75800 440 aa7.1□□□□□ -1.27
SPIRE1-212ENST00000588236 EPAS1Q99814 870 aa7.1□□□□□ -1.27
SPIRE1-212ENST00000588236 SNPHO15079 494 aa7.09□□□□□ -1.27
SPIRE1-212ENST00000588236 MLLT3P42568 568 aaPredicted RBP7.09□□□□□ -1.27
SPIRE1-212ENST00000588236 UPF1Q92900 1129 aaKnown RBP eCLIP7.09□□□□□ -1.27
SPIRE1-212ENST00000588236 BARGINQ6ZT62 677 aa7.08□□□□□ -1.28
SPIRE1-212ENST00000588236 GRXCR2A6NFK2 248 aa7.06□□□□□ -1.28
SPIRE1-212ENST00000588236 PHF14O94880 888 aa7.06□□□□□ -1.28
SPIRE1-212ENST00000588236 KRI1Q8N9T8 703 aaKnown RBP7.06□□□□□ -1.28
SPIRE1-212ENST00000588236 FBXW7Q969H0 707 aa7.06□□□□□ -1.28
SPIRE1-212ENST00000588236 PSDA5PKW4 1024 aaPredicted RBP7.05□□□□□ -1.28
SPIRE1-212ENST00000588236 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
SPIRE1-212ENST00000588236 AK7Q96M32 723 aa7.05□□□□□ -1.28
SPIRE1-212ENST00000588236 PCDHGA4Q9Y5G9 962 aa7.05□□□□□ -1.28
SPIRE1-212ENST00000588236 FCHSD2O94868 740 aa7.04□□□□□ -1.28
SPIRE1-212ENST00000588236 OSBPP22059 807 aa7.04□□□□□ -1.28
SPIRE1-212ENST00000588236 HIC1Q14526 733 aa7.04□□□□□ -1.28
SPIRE1-212ENST00000588236 SLAIN1Q8ND83 568 aa7.04□□□□□ -1.28
SPIRE1-212ENST00000588236 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
SPIRE1-212ENST00000588236 NUTM2FA1L443 756 aa7.03□□□□□ -1.28
SPIRE1-212ENST00000588236 ZNF710Q8N1W2 664 aa7.03□□□□□ -1.28
SPIRE1-212ENST00000588236 CERKQ8TCT0 537 aa7.03□□□□□ -1.28
SPIRE1-212ENST00000588236 TYW1BQ6NUM6 668 aa7.02□□□□□ -1.29
SPIRE1-212ENST00000588236 DDX12PQ92771 950 aa7.02□□□□□ -1.29
SPIRE1-212ENST00000588236 JPH4Q96JJ6 628 aa7.02□□□□□ -1.29
SPIRE1-212ENST00000588236 TMEM132AQ24JP5 1023 aa7.01□□□□□ -1.29
SPIRE1-212ENST00000588236 GNPATO15228 680 aa7□□□□□ -1.29
SPIRE1-212ENST00000588236 EN1Q05925 392 aaPredicted RBP6.99□□□□□ -1.29
SPIRE1-212ENST00000588236 MAP2K5Q13163 448 aa6.99□□□□□ -1.29
SPIRE1-212ENST00000588236 LHX8Q68G74 356 aa6.99□□□□□ -1.29
SPIRE1-212ENST00000588236 ERICH6Q7L0X2 663 aa6.99□□□□□ -1.29
SPIRE1-212ENST00000588236 SLC24A3Q9HC58 644 aa6.99□□□□□ -1.29
SPIRE1-212ENST00000588236 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
SPIRE1-212ENST00000588236 PTGDRQ13258 359 aa6.97□□□□□ -1.29
SPIRE1-212ENST00000588236 MAP3K7O43318 606 aa6.96□□□□□ -1.3
SPIRE1-212ENST00000588236 FOSBP53539 338 aa6.96□□□□□ -1.3
SPIRE1-212ENST00000588236 ZDHHC16Q969W1 377 aa6.96□□□□□ -1.3
SPIRE1-212ENST00000588236 PCDHGA10Q9Y5H3 936 aa6.96□□□□□ -1.3
SPIRE1-212ENST00000588236 IRF6O14896 467 aa6.95□□□□□ -1.3
SPIRE1-212ENST00000588236 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
SPIRE1-212ENST00000588236 HOXB3P14651 431 aaPredicted RBP6.95□□□□□ -1.3
SPIRE1-212ENST00000588236 NEUROD2Q15784 382 aa6.95□□□□□ -1.3
SPIRE1-212ENST00000588236 GPR153Q6NV75 609 aa6.95□□□□□ -1.3
SPIRE1-212ENST00000588236 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
SPIRE1-212ENST00000588236 POTEB2H3BUK9 544 aa6.94□□□□□ -1.3
SPIRE1-212ENST00000588236 GPR37O15354 613 aa6.94□□□□□ -1.3
SPIRE1-212ENST00000588236 BRPF1P55201 1214 aaPredicted RBP6.94□□□□□ -1.3
SPIRE1-212ENST00000588236 PPP4R3BQ5MIZ7 849 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms